RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 STT3BQ8TCJ2 826 aa8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 LZICQ8WZA0 190 aa8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 TANKQ92844 425 aa8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 KCTD14Q9BQ13 255 aaPredicted RBP8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 ZNF768Q9H5H4 540 aaKnown RBP8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 MKKSQ9NPJ1 570 aaPredicted RBP8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 AIG1Q9NVV5 245 aa8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 MRTO4Q9UKD2 239 aaKnown RBP8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
CACNA1A-254ENST00000637952 KLK10O43240 276 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 OXSR1O95747 527 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 LAMP1P11279 417 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 CSRP1P21291 193 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 FAM53BQ14153 422 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PUM1Q14671 1186 aaKnown RBP eCLIP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 LASP1Q14847 261 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NNATQ16517 81 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 YOD1Q5VVQ6 348 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 BROXQ5VW32 411 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 FAM219BQ5XKK7 198 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TMPRSS12Q86WS5 348 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 COX18Q8N8Q8 333 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 OR5M3Q8NGP4 307 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PHOX2BQ99453 314 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TSC22D3Q99576 134 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TUBB1Q9H4B7 451 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 POLR1BQ9H9Y6 1135 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TNFRSF12AQ9NP84 129 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TEX10Q9NXF1 929 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 WBP11Q9Y2W2 641 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SLC22A7Q9Y694 548 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ATG2AQ2TAZ0 1938 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 DSCR3O14972 297 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 P2RX6O15547 441 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PRKRAO75569 313 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NSA2O95478 260 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SELLP14151 372 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PPIBP23284 216 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 CLK3P49761 638 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 RAB38P57729 211 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PSME3P61289 254 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PRSS42Q7Z5A4 293 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PIGWQ7Z7B1 504 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 KRT73Q86Y46 540 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 MARCH9Q86YJ5 346 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 OR2T11Q8NH01 316 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SLC35G5Q96KT7 338 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SLC35A5Q9BS91 424 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 RTKNQ9BST9 563 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 GPR27Q9NS67 375 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ARL8BQ9NVJ2 186 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 KLHL28Q9NXS3 571 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 C17orf105B2RV13 164 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 GTPBP1O00178 669 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 BRINP1O60477 761 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 GALR3O60755 368 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ETHE1O95571 254 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 GPR75O95800 540 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 AIFM1O95831 613 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SPINK2P20155 84 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SLC6A2P23975 617 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 AQP1P29972 269 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ADSLP30566 484 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 MASP1P48740 699 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NRG3P56975 720 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 FOLH1Q04609 750 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 RELQ04864 619 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 EEF1A2Q05639 463 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 GNA13Q14344 377 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 LARP4Q71RC2 724 aaKnown RBP eCLIP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NLGN4XQ8N0W4 816 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 FITM2Q8N6M3 262 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NLGN4YQ8NFZ3 816 aaPredicted RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 WDR20Q8TBZ3 569 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NXPE2Q96DL1 559 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 PELOQ9BRX2 385 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 TAS2R9Q9NYW1 312 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 ITGB1BP2Q9UKP3 347 aa8.1□□□□□ -1.11
CACNA1A-254ENST00000637952 NSG1A0A0A6YYJ2 146 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 TRABD2BA6NFA1 517 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 OR2W5A6NFC9 320 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 IL12BP29460 328 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 SLC7A2P52569 658 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 PDCD4Q53EL6 469 aaKnown RBP8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 TMEM107Q6UX40 140 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 VN1R4Q7Z5H5 301 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 ZNF595Q8IYB9 648 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 DNAJC22Q8N4W6 341 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 MVB12AQ96EY5 273 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 ARMC7Q9H6L4 198 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 KCNK13Q9HB14 408 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 NEUROD4Q9HD90 331 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 FAM120CQ9NX05 1096 aaKnown RBP8.09□□□□□ -1.11
CACNA1A-254ENST00000637952 ZNF225Q9UK10 706 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms