RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CLEC4FQ8N1N0 589 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 METTL27Q8N6F8 245 aaPredicted RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 C7orf57Q8NEG2 295 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 BHLHE22Q8NFJ8 381 aaPredicted RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 STMN2Q93045 179 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 COL26A1Q96A83 441 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 LRGUKQ96M69 825 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 OR1F2PQ96R84 312 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 STRADBQ9C0K7 418 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 SLC7A5P2Q9GIP4 190 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 RASSF4Q9H2L5 321 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 PRTFDC1Q9NRG1 225 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 AKAP7Q9P0M2 348 aaPredicted RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 EGFL7Q9UHF1 273 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAGEL2Q9UJ55 1249 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 TMEM184BQ9Y519 407 aaPredicted RBP11.06□□□□□ -0.64
CLN6-223ENST00000637823 MAU2Q9Y6X3 613 aa11.06□□□□□ -0.64
CLN6-223ENST00000637823 USP34Q70CQ2 3546 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 A0A1W2PS29 197 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 AQP12BA6NM10 295 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PROB1E7EW31 1015 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PLOD2O00469 737 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 POLR1CO15160 346 aaPredicted RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 GDF9O60383 454 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 B4GALT2O60909 372 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 LDB3O75112 727 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 SCRG1O75711 98 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 BMP10O95393 424 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PSMG1O95456 288 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 ATP6V1G2O95670 118 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 ONECUT2O95948 504 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 C1QCP02747 245 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 ATP1B1P05026 303 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 SLC35E2P0CK97 266 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 CDK4P11802 303 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 GGT1P19440 569 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 CRATP43155 626 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 XCR1P46094 333 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PDX1P52945 283 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 MVDP53602 400 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 IGLV3-21P80748 117 aaPredicted RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 SLC13A2Q13183 592 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 COL9A2Q14055 689 aaPredicted RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 ERV3-1Q14264 604 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 TRIP6Q15654 476 aaKnown RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 CYP51A1Q16850 503 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 SYT16Q17RD7 645 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLN6-223ENST00000637823 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLN6-223ENST00000637823 CDCP2Q5VXM1 449 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 GLYATQ6IB77 296 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 LCN8Q6JVE9 175 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PWWP2BQ6NUJ5 590 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 AQP12AQ8IXF9 295 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 SHISA5Q8N114 240 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 BMPERQ8N8U9 685 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 GOLM1Q8NBJ4 401 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 HIPK4Q8NE63 616 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 OR56A1Q8NGH5 318 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 OR5AK3PQ8NH89 298 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PNPT1Q8TCS8 783 aaKnown RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 ELP4Q96EB1 424 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 YIPF2Q9BWQ6 316 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 MKKSQ9NPJ1 570 aaPredicted RBP11.05□□□□□ -0.64
CLN6-223ENST00000637823 NTMQ9P121 344 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 PTGFRNQ9P2B2 879 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 USP22Q9UPT9 525 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 MMACHCQ9Y4U1 282 aa11.05□□□□□ -0.64
CLN6-223ENST00000637823 B4E171 279 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ARPC2O15144 300 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 TNFRSF21O75509 655 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 BMP2P12643 396 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 TSPAN7P41732 249 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 PRIM2P49643 509 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ANXA11P50995 505 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 TXNL4AP83876 142 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 PRR5P85299 388 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 INSM1Q01101 510 aaPredicted RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 ID2Q02363 134 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 RBBP4Q09028 425 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 STX4Q12846 297 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 SERTAD2Q14140 314 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ADRM1Q16186 407 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 MTX3Q5HYI7 312 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 COX20Q5RI15 118 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 C1orf189Q5VU69 101 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 FBXW10Q5XX13 1052 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ANGPTL8Q6UXH0 198 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 CYP2R1Q6VVX0 501 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 SPATA24Q86W54 205 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 RNF130Q86XS8 419 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 PTOV1Q86YD1 416 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms