RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 CSNK2A2P19784 350 aaPredicted RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 FEN1P39748 380 aaKnown RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 ASMTP46597 345 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 ERVK-8P63133 956 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 MAD2L1Q13257 205 aaPredicted RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 SPRED3Q2MJR0 410 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 IRAK1BP1Q5VVH5 260 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 OGFOD2Q6N063 350 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 FAM180BQ6P0A1 224 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 TICAM1Q8IUC6 712 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 LIX1Q8N485 282 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 OR1N1Q8NGS0 311 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 CLHC1Q8NHS4 586 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 C9orf43Q8TAL5 461 aaPredicted RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF721Q8TF20 911 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 NCLNQ969V3 563 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 EXOSC8Q96B26 276 aaKnown RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 VMP1Q96GC9 406 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 WDR55Q9H6Y2 383 aaPredicted RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 CXorf21Q9HAI6 301 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 KCNK13Q9HB14 408 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 G3BP2Q9UN86 482 aaKnown RBP18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 TP53TG5Q9Y2B4 290 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF780BQ9Y6R6 833 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 COL6A6A6NMZ7 2263 aa18.08■□□□□ 0.48
CROCCP4-202ENST00000633627 ATP1B1P05026 303 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 EPHA3P29320 983 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SOX18P35713 384 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 PGDP52209 483 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 MGAT2Q10469 447 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 PDE7AQ13946 482 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 PTGR1Q14914 329 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 CRB2Q5IJ48 1285 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 AGAP7PQ5VUJ5 663 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 IGFL2Q6UWQ7 119 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 FAM47EQ6ZV65 393 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SAMD14Q8IZD0 417 aaPredicted RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SIRT6Q8N6T7 355 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF321PQ8N8H1 164 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SLC2A12Q8TD20 617 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 RIT1Q92963 219 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 GFM2Q969S9 779 aaKnown RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SENP5Q96HI0 755 aaPredicted RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 FBXL20Q96IG2 436 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 AGAP4Q96P64 663 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 NPAS2Q99743 824 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 OR8D2Q9GZM6 311 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 SLC25A18Q9H1K4 315 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 REEP4Q9H6H4 257 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 ZBTB20Q9HC78 741 aaPredicted RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 MIEF1Q9NQG6 463 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 NOP53Q9NZM5 478 aaKnown RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 EIF3LQ9Y262 564 aaKnown RBP18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 USH1CQ9Y6N9 552 aa18.07■□□□□ 0.48
CROCCP4-202ENST00000633627 CPAMD8Q8IZJ3 1885 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 MYO1GB0I1T2 1018 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 HRKO00198 91 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 AKAP10O43572 662 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 LRATO95237 230 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 CT62P0C5K7 136 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 G6PDP11413 515 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 CLCN2P51788 898 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 DIO3P55073 304 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF267Q14586 743 aaPredicted RBP18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 SLC9B1Q4ZJI4 515 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 LACTB2Q53H82 288 aaPredicted RBP18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 B3GNTL1Q67FW5 361 aaPredicted RBP18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 EPGNQ6UW88 154 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ISLR2Q6UXK2 745 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 RIMKLAQ8IXN7 391 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ARMC10Q8N2F6 343 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 LRRC25Q8N386 305 aaPredicted RBP18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 SUN3Q8TAQ9 357 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ACTRT2Q8TDY3 377 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 DOK4Q8TEW6 326 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 MTERF3Q96E29 417 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 LMF1Q96S06 567 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF71Q9NQZ8 489 aaPredicted RBP18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 PTGFRNQ9P2B2 879 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ATP6V1HQ9UI12 483 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 ZNF451Q9Y4E5 1061 aa18.06■□□□□ 0.48
CROCCP4-202ENST00000633627 GOLGA8QA0A0J9YX86 632 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 TRBV11-1A0A0K0K1C0 115 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 GOLGA8OA6NCC3 632 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 GABRR3A8MPY1 467 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 A8MUI8 341 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 TCP11X1B4DZS4 312 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 GOLGA8NF8WBI6 632 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 DYRK3O43781 588 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 EDF1O60869 148 aaKnown RBP18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 TGDSO95455 350 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 ALPPP05187 535 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 S1PR1P21453 382 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 NT5EP21589 574 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 C21orf58P58505 322 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 FUT7Q11130 342 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 MAP4K2Q12851 820 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 MFAP5Q13361 173 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 MPEG1Q2M385 716 aa18.05■□□□□ 0.48
CROCCP4-202ENST00000633627 PRICKLE4Q2TBC4 344 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms