RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 HAS2Q92819 552 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 FCRL1Q96LA6 429 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 OR52B2Q96RD2 323 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 EBF4Q9BQW3 602 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 CLK4Q9HAZ1 481 aaKnown RBP18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 PLA2G3Q9NZ20 509 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 KCMF1Q9P0J7 381 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 C19orf25Q9UFG5 118 aaPredicted RBP18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 MCM8Q9UJA3 840 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 DCTN4Q9UJW0 460 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 ADAM21Q9UKJ8 722 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 DLGAP4Q9Y2H0 992 aa18.66■□□□□ 0.58
R3HCC1-210ENST00000625275 TRAV17A0A0B4J275 112 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 FAM58BPP0C7Q3 252 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 IDH3AP50213 366 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 MAPK12P53778 367 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 HNRNPH2P55795 449 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 INAQ16352 499 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 CPEB2Q7Z5Q1 589 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 BCORP1Q8N888 145 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 FNDC5Q8NAU1 212 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 PEX11GQ96HA9 241 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 MAPKAP1Q9BPZ7 522 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 SLX1AQ9BQ83 275 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 SIKE1Q9BRV8 207 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 C1orf50Q9BV19 199 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 RNF32Q9H0A6 362 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 KCNK13Q9HB14 408 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 LYRM4Q9HD34 91 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 FBXW2Q9UKT8 454 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 TMED5Q9Y3A6 229 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 ASB4Q9Y574 426 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 GNG14A0A1W2PPG7 69 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 GMNCA6NCL1 334 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 MYO1DO94832 1006 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 SEC24DO94855 1032 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 ANXA4P09525 319 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 TROVE2P10155 538 aaKnown RBP eCLIP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 GTF3C1Q12789 2109 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 MAMDC2Q7Z304 686 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 GPR180Q86V85 440 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 ACTRT2Q8TDY3 377 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 CSF3RQ99062 836 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 RBCK1Q9BYM8 510 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 OLAHQ9NV23 265 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 LYARQ9NX58 379 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 ATG4BQ9Y4P1 393 aa18.65■□□□□ 0.58
R3HCC1-210ENST00000625275 IGHV3-20A0A0C4DH32 117 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 A0A0G2JND7 137 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 RNH1P13489 461 aaKnown RBP18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 LBPP18428 481 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 SDC1P18827 310 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 TACR1P25103 407 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 RAB38P57729 211 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 ERVK-8P63133 956 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 EMX2Q04743 252 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 ZNF763Q0D2J5 394 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 SF3A3Q12874 501 aaKnown RBP eCLIP18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 SMU1Q2TAY7 513 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 ABHD17BQ5VST6 288 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 NXNQ6DKJ4 435 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 OGFOD2Q6N063 350 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 AMER2Q8N7J2 671 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 TEX10Q9NXF1 929 aaPredicted RBP18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 TEKT2Q9UIF3 430 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 PHF11Q9UIL8 331 aa18.64■□□□□ 0.57
R3HCC1-210ENST00000625275 A0A1W2PR48 441 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 FAM227AF5H4B4 570 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 CYR61O00622 381 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 SHOX2O60902 331 aaPredicted RBP18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 CLDN1O95832 211 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 WDPCPO95876 746 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 F10P00742 488 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 BCKDHAP12694 445 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 BTBD16Q32M84 506 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 LSM12Q3MHD2 195 aaKnown RBP18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 IL23RQ5VWK5 629 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 PLAG1Q6DJT9 500 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 ACAD11Q709F0 780 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 ANKRD37Q7Z713 158 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 FAM47BQ8NA70 645 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 CEP70Q8NHQ1 597 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 TBC1D20Q96BZ9 403 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 OR1F2PQ96R84 312 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 FAM107BQ9H098 131 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 TCF7L2Q9NQB0 619 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 OSGIN2Q9Y236 505 aa18.63■□□□□ 0.57
R3HCC1-210ENST00000625275 OR2W5A6NFC9 320 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 PSMD12O00232 456 aaPredicted RBP18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 PROM1O43490 865 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 PRKRAO75569 313 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 CDC123O75794 336 aaPredicted RBP18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 ALDOCP09972 364 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 DRD4P21917 467 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 IL10P22301 178 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 CPN2P22792 545 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 MAPK1P28482 360 aa18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 HNRNPFP52597 415 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-210ENST00000625275 DIO3P55073 304 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms