RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 WACQ9BTA9 647 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 C1QTNF7Q9BXJ2 289 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SLC28A3Q9HAS3 691 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 COQ3Q9NZJ6 369 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 GSTK1Q9Y2Q3 226 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 QSOX1O00391 747 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 FAAHO00519 579 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 NCR1O76036 304 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 APOL3O95236 402 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 GBAP04062 536 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 NR2F6P10588 404 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 PTBP1P26599 531 aaKnown RBP eCLIP13.4□□□□□ -0.26
LDB3-209ENST00000623056 RPS13P62277 151 aaKnown RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 RGS1Q08116 209 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 RIN1Q13671 783 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 FCN2Q15485 313 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 RPS26P11Q5JNZ5 115 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 C3orf38Q5JPI3 329 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF57Q68EA5 555 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 PGBD2Q6P3X8 592 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 SERPINA13PQ6UXR4 307 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 OR7G3Q8NG95 312 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 SENP5Q96HI0 755 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 LRR1Q96L50 414 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZSCAN32Q9NX65 697 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 GULP1Q9UBP9 304 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 I3L521 148 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 CHP2O43745 196 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 GPR37L1O60883 481 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 TBL1XO60907 577 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 TP53P04637 393 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF250P15622 560 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ENPP1P22413 925 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 PTGS2P35354 604 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 SOAT1P35610 550 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 CSKP41240 450 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 CCL23P55773 120 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF763Q0D2J5 394 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 LRRC32Q14392 662 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 CRTC1Q6UUV9 634 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF783Q6ZMS7 281 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 OTOP2Q7RTS6 562 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 UFD1Q92890 307 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 PHF21AQ96BD5 680 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 MED8Q96G25 268 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 ZNF582Q96NG8 517 aaPredicted RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 POLDIP3Q9BY77 421 aaKnown RBP13.4□□□□□ -0.26
LDB3-209ENST00000623056 OR51B4Q9Y5P0 310 aa13.4□□□□□ -0.26
LDB3-209ENST00000623056 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.27
LDB3-209ENST00000623056 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 SCN10AQ9Y5Y9 1956 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 IGLV3-16A0A075B6K0 115 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 A0A0A6YYJ9 748 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 GTPBP1O00178 669 aaKnown RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 FGF9P31371 208 aaPredicted RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 GABRA5P31644 462 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 GAS1P54826 345 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 CTBP2P56545 445 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 DSTNP60981 165 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 CAP1Q01518 475 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 GPR17Q13304 367 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 NAE1Q13564 534 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 CCDC85BQ15834 202 aaPredicted RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 ZFP41Q8N8Y5 198 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.27
LDB3-209ENST00000623056 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 ACAT2Q9BWD1 397 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 GPR62Q9BZJ7 368 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 SPNS1Q9H2V7 528 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PIGUQ9H490 435 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 ING4Q9UNL4 249 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 NCKAP1Q9Y2A7 1128 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 FURINP09958 794 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 AKR1A1P14550 325 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 HK1P19367 917 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 BDKRB1P46663 353 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PTPN5P54829 565 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 UBE3AQ05086 875 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 ZNF284Q2VY69 593 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PLEKHS1Q5SXH7 462 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 REEP3Q6NUK4 255 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 TCTN3Q6NUS6 607 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 DNAJC5GQ8N7S2 189 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms