RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KLHL4Q9C0H6 718 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CD248Q9HCU0 757 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SMOXQ9NWM0 555 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CAMK2AQ9UQM7 478 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TESMINQ9Y4I5 508 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 LILRA5A6NI73 299 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NPIPA2E9PIF3 369 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NPIPA3F8WFD2 350 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ASNA1O43681 348 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 CCL4P13236 92 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 POU3F3P20264 500 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 IDH3AP50213 366 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 OR2B6P58173 313 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 GPR85P60893 370 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 EXOSC7Q15024 291 aaKnown RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 RCN1Q15293 331 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SLC30A6Q6NXT4 461 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NANOGNBQ7Z5D8 188 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 KBTBD2Q8IY47 623 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 FAM81AQ8TBF8 368 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 AURKBQ96GD4 344 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 APIPQ96GX9 242 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BTBD10Q9BSF8 475 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SLC5A10A0PJK1 596 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF891A8MT65 544 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BLOC1S5-TXNDC5H3BN57 136 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 hCG_2039718K7EN88 272 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BCAS2O75934 225 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SLCO2B1O94956 709 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 GPR75O95800 540 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 POU2F1P14859 743 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 XRCC1P18887 633 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 GSTM2P28161 218 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SSR4P51571 173 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 EPHA4P54764 986 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 CDH12P55289 794 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 TAS2R38P59533 333 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 FOLH1Q04609 750 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 STK11Q15831 433 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ATG9BQ674R7 924 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 LETMD1Q6P1Q0 360 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF572Q7Z3I7 529 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 OR9A2Q8NGT5 310 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 C16orf78Q8WTQ4 265 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 EFHD2Q96C19 240 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MAGEL2Q9UJ55 1249 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 PARP14Q460N5 1801 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SCN5AQ14524 2016 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NME6O75414 186 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 JRKO75564 520 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 IGHV4-34P06331 123 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 SPTBP11277 2137 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 PRG2P13727 222 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF823P16415 610 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BCL6P41182 706 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MC3RP41968 323 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 PFN3P60673 137 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MRPS15P82914 257 aaKnown RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 KLC1Q07866 573 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 AGAP7PQ5VUJ5 663 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 C19orf48Q6RUI8 117 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 C6orf120Q7Z4R8 191 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MFSD9Q8NBP5 474 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 OR56A3Q8NH54 315 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 PIGXQ8TBF5 258 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 AGAP4Q96P64 663 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ASPNQ9BXN1 380 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NEK6Q9HC98 313 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 USP36Q9P275 1121 aaKnown RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 LOXHD1Q8IVV2 1947 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 EEF1E1-BLOC1S5C9J1V9 151 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 EEF1E1O43324 174 aaKnown RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 PRAMEF10O60809 474 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 MYL12AP19105 171 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NCF4Q15080 339 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 IFI44LQ53G44 452 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 CDKL4Q5MAI5 379 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 KIAA1614Q5VZ46 1190 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 FAM220AQ7Z4H9 259 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF595Q8IYB9 648 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NFKBIDQ8NI38 313 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 CREB3L4Q8TEY5 395 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 ALG2Q9H553 416 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 CD320Q9NPF0 282 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 B3GAT2Q9NPZ5 323 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 NENFQ9UMX5 172 aa8.6□□□□□ -1.03
HDAC9-229ENST00000622668 BRCA1P38398 1863 aaKnown RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 D6RAR5 112 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 NPIPA5E9PKD4 350 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 KLRC4-KLRK1H3BQV0 150 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 PGCP20142 388 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 SLC18A2Q05940 514 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms