RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GPC1P35052 558 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 SOAT1P35610 550 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 C8orf82Q6P1X6 216 aaPredicted RBP16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 MED25Q71SY5 747 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 OVCH1Q7RTY7 1134 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 MSRB3Q8IXL7 192 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 STT3BQ8TCJ2 826 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 GPATCH1Q9BRR8 931 aaKnown RBP16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 AKIRIN1Q9H9L7 192 aaPredicted RBP16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 FOXJ2Q9P0K8 574 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 MMACHCQ9Y4U1 282 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 SDK2Q58EX2 2172 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 IGLV3-12A0A075B6K2 115 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 TRBV5-3A0A0A0MS03 114 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 DCDC2BA2VCK2 349 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 TGFBR3LH3BV60 316 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 HOXB9P17482 250 aaPredicted RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 SDHBP21912 280 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC6A2P23975 617 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 CDK9P50750 372 aaKnown RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 GAB1Q13480 694 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 MLIPQ5VWP3 458 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 NANOGP8Q6NSW7 305 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 BNC2Q6ZN30 1099 aaPredicted RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 TRIML2Q8N7C3 387 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 OR9A2Q8NGT5 310 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 MCUR1Q96AQ8 359 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 FKBP10Q96AY3 582 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 AURKBQ96GD4 344 aaPredicted RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 ANKRD27Q96NW4 1050 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 THTPAQ9BU02 230 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 ALOXE3Q9BYJ1 711 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 TRIM8Q9BZR9 551 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 TGIF2Q9GZN2 237 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 CHST8Q9H2A9 424 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 DENND2DQ9H6A0 471 aaPredicted RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 CXorf36Q9H7Y0 433 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 NANOGQ9H9S0 305 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 SPAG4Q9NPE6 437 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 C14orf105Q9NVL8 296 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 ADA2Q9NZK5 511 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 GPN3Q9UHW5 284 aaPredicted RBP16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 NEUROG3Q9Y4Z2 214 aa16.71■□□□□ 0.27
PTCHD3-202ENST00000622555 C15orf38-AP3S2A0A0A6YYH1 394 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 OR10H2O60403 315 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ZGLP1P0C6A0 271 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ZCCHC18P0CG32 403 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC7A2P52569 658 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 GABREP78334 506 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 IGLV3-21P80748 117 aaPredicted RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 LTB4RQ15722 352 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SPDYE7PQ495Y7 208 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 FAM199XQ6PEV8 388 aaPredicted RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 C6orf15Q6UXA7 325 aaPredicted RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 QSOX2Q6ZRP7 698 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SHISA6Q6ZSJ9 500 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 TMPRSS7Q7RTY8 843 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ARPINQ7Z6K5 226 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 CLEC4FQ8N1N0 589 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 CDRT15Q96T59 188 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC35A5Q9BS91 424 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 TRIM4Q9C037 500 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SEMA3GQ9NS98 782 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SIRT3Q9NTG7 399 aaPredicted RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 MKL2Q9ULH7 1088 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 PCDHGA8Q9Y5G5 932 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 C9J4A7 227 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 DLGAP3O95886 979 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ALBP02768 609 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC35E2P0CK97 266 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 NT5EP21589 574 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 PGM1P36871 562 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 MTPNP58546 118 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 RHAGQ02094 409 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 NKG7Q16617 165 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 RUNDC3AQ59EK9 446 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 RABL3Q5HYI8 236 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 LAPTM4BQ86VI4 370 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 OR5AK3PQ8NH89 298 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 PSMA8Q8TAA3 256 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 VN1R1Q9GZP7 353 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 L3MBTL1Q9Y468 752 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 CLDN16Q9Y5I7 305 aa16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.7■□□□□ 0.26
PTCHD3-202ENST00000622555 ATP1B1P05026 303 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 UQCRC2P22695 453 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 CHI3L1P36222 383 aaPredicted RBP16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 FOXL2P58012 376 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 SERTAD2Q14140 314 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 SELPLGQ14242 412 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 FAM198BQ6UWH4 519 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM107Q6UX40 140 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 ST13P4Q8IZP2 240 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms