RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 C2orf80Q0P641 193 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 PTGR1Q14914 329 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 LACTB2Q53H82 288 aaPredicted RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 AGAP7PQ5VUJ5 663 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 IL23RQ5VWK5 629 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 JMJD6Q6NYC1 403 aaPredicted RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 TICAM1Q8IUC6 712 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 FNDC5Q8NAU1 212 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 MORN4Q8NDC4 146 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 CDC26Q8NHZ8 85 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 DAZLQ92904 295 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 GFM2Q969S9 779 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 MAELQ96JY0 434 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 AGAP4Q96P64 663 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 TAS2R7Q9NYW3 318 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 WBP11Q9Y2W2 641 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 CSAG2Q9Y5P2 127 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 PGDP52209 483 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 DIO3P55073 304 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 EMX2Q04743 252 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 MGAT2Q10469 447 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 PDE7AQ13946 482 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF385BQ569K4 471 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 CRB2Q5IJ48 1285 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 FCRLBQ6BAA4 426 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 ASB18Q6ZVZ8 466 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 ARMC10Q8N2F6 343 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 LIX1Q8N485 282 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 C7orf57Q8NEG2 295 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 RIT1Q92963 219 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
CBWD3-217ENST00000621474 VMP1Q96GC9 406 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 SENP5Q96HI0 755 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-217ENST00000621474 FBXL20Q96IG2 436 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 WDR55Q9H6Y2 383 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-217ENST00000621474 SLAMF7Q9NQ25 335 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 SLC35C2Q9NQQ7 365 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 ASIC5Q9NY37 505 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 PCDHGB7Q9Y5F8 929 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 RELNP78509 3460 aa13.32□□□□□ -0.28
CBWD3-217ENST00000621474 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 DYNC1I1O14576 645 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 OR10H2O60403 315 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 LRATO95237 230 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 G6PDP11413 515 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SFTPCP11686 197 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 COX7A2P14406 83 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 PORP16435 677 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 S1PR1P21453 382 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 EPHA3P29320 983 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 CLCN2P51788 898 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ERVK-8P63133 956 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 LTB4RQ15722 352 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SMU1Q2TAY7 513 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ANKRD26P1Q6NSI1 321 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ISLR2Q6UXK2 745 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 LINC00696Q6ZRV3 163 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 FAM47EQ6ZV65 393 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 CRLF3Q8IUI8 442 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 C9orf40Q8IXQ3 194 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 RBMXL3Q8N7X1 1067 aaKnown RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SIMC1Q8NDZ2 872 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF764Q96H86 408 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 PELOQ9BRX2 385 aaKnown RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 KCNK13Q9HB14 408 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 MAT2BQ9NZL9 334 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ERVK-19Q9WJR5 959 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 GOLGA8QA0A0J9YX86 632 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 GOLGA8OA6NCC3 632 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 A8MUI8 341 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 GOLGA8NF8WBI6 632 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SLCO1B7G3V0H7 640 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 TNNI3P19429 210 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 CSNK2A2P19784 350 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SSTR4P31391 388 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ST13P50502 369 aaKnown RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 SLC37A1P57057 533 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 AP2B1P63010 937 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 FUT7Q11130 342 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 DUSP8Q13202 625 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 MFAP5Q13361 173 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 OGFOD2Q6N063 350 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 GALNT12Q8IXK2 581 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 RIMKLAQ8IXN7 391 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms