RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DOCK10Q96BY6 2186 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 FAM208BQ5VWN6 2430 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 SPG11Q96JI7 2443 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 FUCA1P04066 466 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 DCNP07585 359 aaKnown RBP7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 ITGB8P26012 769 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 NDUFS1P28331 727 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 CA5AP35218 305 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 NR0B1P51843 470 aaKnown RBP7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 AP1S2P56377 157 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 ELOCQ15369 112 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 GLB1L3Q8NCI6 653 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 PPP1R14BQ96C90 147 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 KCNC2Q96PR1 638 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 DEFB126Q9BYW3 111 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 P2RY12Q9H244 342 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 RNF121Q9H920 327 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 TPT1P8Q9HAU6 139 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 KCNK12Q9HB15 430 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 ZNF334Q9HCZ1 680 aaPredicted RBP7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 WDR45Q9Y484 360 aa7.9□□□□□ -1.14
PTPDC1-204ENST00000620992 SDK2Q58EX2 2172 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 PIKFYVEQ9Y2I7 2098 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF726A6NNF4 738 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 VNN2O95498 520 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ALPPP05187 535 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 HEXBP07686 556 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 HNRNPA1P09651 372 aaKnown RBP eCLIP7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ADRB3P13945 408 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF30P17039 623 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 PRPS1L1P21108 318 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 CXCL12P48061 93 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 TUBA3CQ13748 450 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 SCARB2Q14108 478 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 NSDHLQ15738 373 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 OR5M10Q6IEU7 315 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ADGRD2Q7Z7M1 963 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 OAFQ86UD1 273 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC9B2Q86UD5 537 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 RANBP3LQ86VV4 465 aaPredicted RBP7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 RNF130Q86XS8 419 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 AMER2Q8N7J2 671 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 OR5AR1Q8NGP9 310 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 PIGXQ8TBF5 258 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 SETD6Q8TBK2 473 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 EGLN2Q96KS0 407 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 Q96MT0 163 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 WDR77Q9BQA1 342 aaPredicted RBP7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 HMG20AQ9NP66 347 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 IL26Q9NPH9 171 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 DNAJC27Q9NZQ0 273 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 ERVK-18Q9QC07 812 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 OARD1Q9Y530 152 aa7.9□□□□□ -1.15
PTPDC1-204ENST00000620992 TRBC2A0A5B9 178 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF99A8MXY4 864 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CLDN25C9JDP6 229 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 HPRP00739 348 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PLATP00750 562 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PDYNP01213 254 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 F11P03951 625 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TACR1P25103 407 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PTX3P26022 381 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 BCAP31P51572 246 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 VBP1P61758 197 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RELAQ04206 551 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 AQP6Q13520 282 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 IFI44LQ53G44 452 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RUNDC3AQ59EK9 446 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 Q6ZSR6 202 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ABHD13Q7L211 337 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DCP2Q8IU60 420 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MSRB3Q8IXL7 192 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 C10orf111Q8N326 155 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RNF175Q8N4F7 328 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DEFB123Q8N688 67 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 FOXJ1Q92949 421 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RHBDF1Q96CC6 855 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CMTM7Q96FZ5 175 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DPH2Q9BQC3 489 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TRIM2Q9C040 744 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DCAF13Q9NV06 445 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PEPDP12955 493 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MYL9P24844 172 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 GABRA3P34903 492 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 NUP62P37198 522 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CDK6Q00534 326 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DNASE1L3Q13609 305 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 NPTX1Q15818 432 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 OLFML2AQ68BL7 652 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF551Q7Z340 670 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 WDR53Q7Z5U6 358 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TRUB1Q8WWH5 349 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TAMM41Q96BW9 452 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CHFRQ96EP1 664 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PYURFQ96I23 114 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PDCD10Q9BUL8 212 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ACPTQ9BZG2 426 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RACGAP1Q9H0H5 632 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 KCNN2Q9H2S1 579 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms