RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 NR0B1P51843 470 aaKnown RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 SPCS3P61009 180 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 ERVK-25P63136 954 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 CAP1Q01518 475 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 DEFA5Q01523 94 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 MAP4K2Q12851 820 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 GTF2H3Q13889 308 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 ARHGAP15Q53QZ3 475 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 XKR7Q5GH72 579 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 C3orf38Q5JPI3 329 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HECTD3Q5T447 861 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HIST2H2AA3Q6FI13 130 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 AFTPHQ6ULP2 937 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 BHLHA9Q7RTU4 235 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 MAMDC2Q7Z304 686 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 SLC44A2Q8IWA5 706 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 HASPINQ8TF76 798 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 TMEM41AQ96HV5 264 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HIST1H2AHQ96KK5 128 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HIST1H2AJQ99878 128 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 SLC25A51Q9H1U9 297 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 VAPAQ9P0L0 249 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 TRPS1Q9UHF7 1281 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 NEU3Q9UQ49 428 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 NCF1BA6NI72 391 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 NCF1CA8MVU1 366 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 GPR171O14626 319 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 PRKRAO75569 313 aaKnown RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 ODC1P11926 461 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 CCL5P13501 91 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 MMP12P39900 470 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 PIK3CGP48736 1102 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 NUDT6P53370 316 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 ACTR1AP61163 376 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 RNF4P78317 190 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 DOC2BQ14184 412 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 GPR176Q14439 515 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 RAB41Q5JT25 222 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 CNIH2Q6PI25 160 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 WASH2PQ6VEQ5 465 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 PGAP1Q75T13 922 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 FAM126BQ8IXS8 530 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 MOSPD2Q8NHP6 518 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 EXOSC8Q96B26 276 aaKnown RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 TRIM43Q96BQ3 446 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 ART5Q96L15 291 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 CMSS1Q9BQ75 279 aaKnown RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 CRB3Q9BUF7 120 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 ALX4Q9H161 411 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 TAS2R16Q9NYV7 291 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 DMRT1Q9Y5R6 373 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 A0A0U1RQF3 1178 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 SLC9B1P1A6NJY1 282 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 CHURC1-FNTBB4DL54 471 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 TERTO14746 1132 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 GABRDO14764 452 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 GPR37O15354 613 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 CD63P08962 238 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 AKR1A1P14550 325 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 ACTR1BP42025 376 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 VSX2P58304 361 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 TIAL1Q01085 375 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS11-207ENST00000620429 ACY1Q03154 408 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 P2RY14Q15391 338 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RBBP7Q16576 425 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RNF212Q495C1 297 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 SLC9B2Q86UD5 537 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RNF113BQ8IZP6 322 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 OR2T11Q8NH01 316 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RHEBL1Q8TAI7 183 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 TMEM163Q8TC26 289 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 POF1BQ8WVV4 589 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ZNF599Q96NL3 588 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ZYG11BQ9C0D3 744 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 FN3KQ9H479 309 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 PRMT8Q9NR22 394 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 RAD18Q9NS91 495 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 NDUFB11Q9NX14 153 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 NDUFAF4Q9P032 175 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ARL5CA6NH57 179 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 MYO1GB0I1T2 1018 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 FAM220BPB1ANY3 271 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 FGF10O15520 208 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 RAD1O60671 282 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RGS11O94810 467 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 GADD45GO95257 159 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 GLP2RO95838 553 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 MOCS2O96007 188 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 POMCP01189 267 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ENGP17813 658 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 ATP5A1P25705 553 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 ACLYP53396 1101 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms