RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RABEP2Q9H5N1 569 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 LYRM4Q9HD34 91 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 KLHL14Q9P2G3 628 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 MRPS33Q9Y291 106 aaKnown RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 A0A0A6YYD5 115 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF195O14628 629 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 JRKO75564 520 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 SCELO95171 688 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 PRPS2P11908 318 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ACPPP15309 386 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 DRD4P21917 467 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 TPP2P29144 1249 aaPredicted RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 XCR1P46094 333 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 GSTM5P46439 218 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 RAB38P57729 211 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 TRA2BP62995 288 aaKnown RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 SNRPNP63162 240 aaKnown RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 KLC1Q07866 573 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF763Q0D2J5 394 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 RUNX2Q13950 521 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 SYT16Q17RD7 645 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 IL23RQ5VWK5 629 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF324BQ6AW86 544 aaPredicted RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 LARP4Q71RC2 724 aaKnown RBP eCLIP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 SPATA21Q7Z572 469 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 FAM9CQ8IZT9 166 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 LIX1Q8N485 282 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 AMER3Q8N944 861 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 CATSPER1Q8NEC5 780 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 STT3BQ8TCJ2 826 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 C16orf78Q8WTQ4 265 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 OR52B2Q96RD2 323 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 LMF1Q96S06 567 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF160Q9HCG1 818 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 SIRT5Q9NXA8 310 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 MS4A12Q9NXJ0 267 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF282Q9UDV7 671 aaPredicted RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 TRIM33Q9UPN9 1127 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 TEP1Q99973 2627 aaKnown RBP13.91□□□□□ -0.18
UBXN1-218ENST00000616865 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
UBXN1-218ENST00000616865 E9PBE3 544 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 UBDO15205 165 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 TMPRSS11DO60235 418 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 BCKDHAP12694 445 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 IL10P22301 178 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 JAK1P23458 1154 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 ASMTP46597 345 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 LIM2P55344 173 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 TAS2R50P59544 299 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 STX1BP61266 288 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 RAE1P78406 368 aaKnown RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 ARG2P78540 354 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 C2orf80Q0P641 193 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 INAQ16352 499 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 LSM12Q3MHD2 195 aaKnown RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 SP5Q6BEB4 398 aaPredicted RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 CGB2Q6NT52 195 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 GALNT18Q6P9A2 607 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 MCEMP1Q8IX19 187 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 TMEM132CQ8N3T6 1108 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 FAM47BQ8NA70 645 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 OR1N1Q8NGS0 311 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 RELTQ969Z4 430 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 TBC1D20Q96BZ9 403 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 MIEF2Q96C03 454 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 C8orf44Q96CB5 159 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 MAELQ96JY0 434 aaKnown RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 MAPKAP1Q9BPZ7 522 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 EBF4Q9BQW3 602 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF717Q9BY31 904 aaPredicted RBP13.9□□□□□ -0.18
UBXN1-218ENST00000616865 RBCK1Q9BYM8 510 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 C14orf105Q9NVL8 296 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 DLGAP4Q9Y2H0 992 aa13.9□□□□□ -0.18
UBXN1-218ENST00000616865 APCP25054 2843 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 SVILO95425 2214 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 CLDN4O14493 209 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 PCDH17O14917 1159 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 SHOX2O60902 331 aaPredicted RBP13.89□□□□□ -0.19
UBXN1-218ENST00000616865 B4GALT2O60909 372 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 ZGLP1P0C6A0 271 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 PRR35P0CG20 571 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 NR2F6P10588 404 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 COX6A1P12074 109 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 POU3F2P20265 443 aaPredicted RBP13.89□□□□□ -0.19
UBXN1-218ENST00000616865 SOX11P35716 441 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 HNRNPH2P55795 449 aaKnown RBP13.89□□□□□ -0.19
UBXN1-218ENST00000616865 KCNK10P57789 538 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 HEPACAMQ14CZ8 416 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 KIAA0040Q15053 153 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 MINDY4Q4G0A6 757 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 OGFOD2Q6N063 350 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 KBTBD2Q8IY47 623 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 PRSS58Q8IYP2 241 aa13.89□□□□□ -0.19
UBXN1-218ENST00000616865 CLHC1Q8NHS4 586 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms