RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 H0YHG0 523 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 GFYI3L273 518 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 PRMT3O60678 531 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 PDE9AO76083 593 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 SLC16A8O95907 504 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 ERGP11308 486 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 CALB2P22676 271 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 CMPK1P30085 196 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 BNIP1Q12981 228 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 PDCD2Q16342 344 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 DEFB113Q30KQ7 82 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 LGI4Q8N135 537 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 POGLUT1Q8NBL1 392 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 ZNF480Q8WV37 535 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 NSL1Q96IY1 281 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR2A5Q96R48 311 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 NUF2Q9BZD4 464 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 SHCBP1LQ9BZQ2 653 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 IKZF3Q9UKT9 509 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 FIS1Q9Y3D6 152 aa16.39■□□□□ 0.21
TRAPPC3-209ENST00000616395 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 CYC1P08574 325 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 TPP2P29144 1249 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 HMOX2P30519 316 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 HOXC12P31275 282 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 AGTR2P50052 363 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 NR0B1P51843 470 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 PNLIPRP1P54315 467 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 CDH13P55290 713 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 TAS2R50P59544 299 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 STX1BP61266 288 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 NAA25Q14CX7 972 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 ARHGAP11AQ6P4F7 1023 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 PAPD4Q6PIY7 484 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 PAQR7Q86WK9 346 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 FBXO15Q8NCQ5 510 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR5M3Q8NGP4 307 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR10Q1Q8NGQ4 319 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR9A4Q8NGU2 314 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 ACTRT2Q8TDY3 377 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 RHBDF1Q96CC6 855 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 FBXL8Q96CD0 374 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 TAC3Q9UHF0 121 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 PDE10AQ9Y233 779 aa16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 RRP15Q9Y3B9 282 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-209ENST00000616395 CSPG4Q6UVK1 2322 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 IGKV1-8A0A0C4DH67 115 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 P2RX6O15547 441 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 LY6G6DO95868 133 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 RAF1P04049 648 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 PCSK6P29122 969 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 IMPA1P29218 277 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 GGT5P36269 586 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 HSD17B2P37059 387 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 KIR2DL3P43628 341 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 AVPR1BP47901 424 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 CYB561P49447 251 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 FAM53BQ14153 422 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 MAPRE2Q15555 327 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 PHKG1Q16816 387 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 GALNTL6Q49A17 601 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 SFT2D3Q587I9 215 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 MILR1Q7Z6M3 343 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 RPS19BP1Q86WX3 136 aaKnown RBP16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 SULF2Q8IWU5 870 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 DDIASQ8IXT1 998 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 ARHGAP24Q8N264 748 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 RERGQ96A58 199 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 TMEM125Q96AQ2 219 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 SLC6A16Q9GZN6 736 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 IPPKQ9H8X2 491 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 MEAF6Q9HAF1 191 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 CRIM1Q9NZV1 1036 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 HEATR5BQ9P2D3 2071 aa16.37■□□□□ 0.21
TRAPPC3-209ENST00000616395 SKAP2O75563 359 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 ATE1O95260 518 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 PCSK2P16519 638 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 PRDX6P30041 224 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 ARRB2P32121 409 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 XCR1P46094 333 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 HSPA7P48741 367 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 ACTN3Q08043 901 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 KANK2Q63ZY3 851 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 PRSS41Q7RTY9 318 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 GOLGA7Q7Z5G4 137 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 LIX1LQ8IVB5 337 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 KIF2BQ8N4N8 673 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 SNX31Q8N9S9 440 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR52N2Q8NGI0 321 aa16.36■□□□□ 0.21
TRAPPC3-209ENST00000616395 OR51Q1Q8NH59 317 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms