RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 NOVA1P51513 510 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 VWA2Q5GFL6 755 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 PIGGQ5H8A4 983 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 SZRD1Q7Z422 152 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 PRSS58Q8IYP2 241 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 FAM156AQ8NDB6 213 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 ADCY4Q8NFM4 1077 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 MAGED4Q96JG8 741 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 ECSITQ9BQ95 431 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CPPED1Q9BRF8 314 aaPredicted RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 TPT1P8Q9HAU6 139 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 MKKSQ9NPJ1 570 aaPredicted RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 CTSFQ9UBX1 484 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 B3GALT1Q9Y5Z6 326 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 EVPLLA8MZ36 301 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 TM4SF5O14894 197 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 PLD2O14939 933 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 DKK1O94907 266 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 BMP10O95393 424 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 CEACAM1P13688 526 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 MSX2P35548 267 aaPredicted RBP16.47■□□□□ 0.23
SREK1-216ENST00000612404 LTB4RQ15722 352 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 IFNEQ86WN2 208 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 TRIM4Q9C037 500 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 SEMA3GQ9NS98 782 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 SLC22A11Q9NSA0 550 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 SLC7A8Q9UHI5 535 aa16.47■□□□□ 0.23
SREK1-216ENST00000612404 RNF103-CHMP3A0A140T963 221 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 PRORSD1PA6NEY8 169 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 H0YHG0 523 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 MEN1O00255 615 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 UQCRC2P22695 453 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 RORAP35398 523 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 HSD17B7P56937 341 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 CORO7P57737 925 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 LIPEQ05469 1076 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 EIF3IQ13347 325 aaKnown RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 C3orf38Q5JPI3 329 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 TMEM107Q6UX40 140 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 COX15Q7KZN9 410 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 ZC3H7AQ8IWR0 971 aaKnown RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 ZFP90Q8TF47 636 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 TAAR9Q96RI9 348 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 TMEM121BQ9BXQ6 578 aaPredicted RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 SIRT3Q9NTG7 399 aaPredicted RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 IFT80Q9P2H3 777 aaPredicted RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 GMPR2Q9P2T1 348 aaKnown RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 OR10H2O60403 315 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 CIB2O75838 187 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 AGXTP21549 392 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 IL10P22301 178 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 ME2P23368 584 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 OCA2Q04671 838 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 OR10A6Q8NH74 314 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 KAT2AQ92830 837 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
SREK1-216ENST00000612404 PTCHD1Q96NR3 888 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 ALOXE3Q9BYJ1 711 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 ASPSCR1Q9BZE9 553 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 ALG2Q9H553 416 aa16.46■□□□□ 0.23
SREK1-216ENST00000612404 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 TGFBR3LH3BV60 316 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 KLK3P07288 261 aaPredicted RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 NT5EP21589 574 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 PPIBP23284 216 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 SOX11P35716 441 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 MC3RP41968 323 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 CCT3P49368 545 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 CASP9P55211 416 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 TARDBPQ13148 414 aaKnown RBP eCLIP16.45■□□□□ 0.223e-6■□□□□ 9.9
SREK1-216ENST00000612404 ZNF385CQ66K41 422 aaPredicted RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 WDR36Q8NI36 951 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 PSMA8Q8TAA3 256 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 KCTD14Q9BQ13 255 aaPredicted RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 DPH2Q9BQC3 489 aaPredicted RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 CD300AQ9UGN4 299 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 CDV3Q9UKY7 258 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 MKL2Q9ULH7 1088 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 SATB2Q9UPW6 733 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 FAM149AA5PLN7 773 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 ATP1B1P05026 303 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 SLC35E2P0CK97 266 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 GSK3BP49841 420 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 PRKAG1P54619 331 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 EEFSECP57772 596 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 MRPS35P82673 323 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 TP53BP2Q13625 1128 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
SREK1-216ENST00000612404 MLIPQ5VWP3 458 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 SHISA6Q6ZSJ9 500 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 STT3BQ8TCJ2 826 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 ZPBPQ9BS86 351 aa16.45■□□□□ 0.22
SREK1-216ENST00000612404 KAT8Q9H7Z6 458 aaKnown RBP16.45■□□□□ 0.22
SREK1-216ENST00000612404 NECTIN3Q9NQS3 549 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms