RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SMIM10Q96HG1 83 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF597Q96LX8 424 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 IP6K3Q96PC2 410 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 HBEGFQ99075 208 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 Q9H521 79 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 NANOGQ9H9S0 305 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 MKKSQ9NPJ1 570 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 TRPC4Q9UBN4 977 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 EIF3LQ9Y262 564 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 MRPS2Q9Y399 296 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 PTRH2Q9Y3E5 179 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 SNX13Q9Y5W8 968 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 MGAQ8IWI9 3026 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ZFYVE26Q68DK2 2539 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 TCRBV5S2A0A599 114 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 DHRS12A0PJE2 317 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 CDC14CA4D256 554 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 SGK494L7N484 410 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 FFAR3O14843 346 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ARPC2O15144 300 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 GPR42O15529 346 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 HNRNPRO43390 633 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 GALR3O60755 368 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 CNOT3O75175 753 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 RSL1D1O76021 490 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 KLHL18O94889 574 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 KRT6AP02538 564 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 KRT6BP04259 564 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ITGB2P05107 769 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 GPIP06744 558 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ZGLP1P0C6A0 271 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF888P0CJ79 500 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 PCNAP12004 261 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF10P21506 573 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 IL10P22301 178 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 PRPH2P23942 346 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 KRT6CP48668 564 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 CHN2P52757 468 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 TGM3Q08188 693 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 CPSF6Q16630 551 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 UGT8Q16880 541 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 TRIM40Q6P9F5 258 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 SLC2A7Q6PXP3 512 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 RAB43Q86YS6 212 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ADGRG5Q8IZF4 528 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 AMER3Q8N944 861 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 PAPD5Q8NDF8 572 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 OR51Q1Q8NH59 317 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 STT3BQ8TCJ2 826 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 MS4A6EQ96DS6 147 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 SPSB2Q99619 263 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 KCTD14Q9BQ13 255 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 MS4A8Q9BY19 250 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 TGIF2Q9GZN2 237 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 REXO4Q9GZR2 422 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 ALG2Q9H553 416 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 LRTM1Q9HBL6 345 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 FARSBQ9NSD9 589 aaKnown RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 C14orf105Q9NVL8 296 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 SLAMF8Q9P0V8 285 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 LHX6Q9UPM6 363 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 POLHQ9Y253 713 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 NAALAD2Q9Y3Q0 740 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 POLR3HQ9Y535 204 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-217ENST00000611848 AP4B1Q9Y6B7 739 aa8.32□□□□□ -1.08
SMAD4-217ENST00000611848 CNTRLQ7Z7A1 2325 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 FOXE1O00358 373 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-217ENST00000611848 TBX6O95947 436 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-217ENST00000611848 IGHEP01854 428 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ZCCHC18P0CG32 403 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 PRKAR1AP10644 381 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 UMPSP11172 480 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ACPPP15309 386 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ARFIP1P53367 373 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 RAB8AP61006 207 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
SMAD4-217ENST00000611848 RPL38P63173 70 aaKnown RBP8.31□□□□□ -1.08
SMAD4-217ENST00000611848 HMGCS1Q01581 520 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF33BQ06732 778 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 IL10RAQ13651 578 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 DEFB134Q4QY38 66 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 TMEM35AQ53FP2 167 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 VWA2Q5GFL6 755 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 TOR1AIP1Q5JTV8 583 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 DEPDC1Q5TB30 811 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 PPP4R4Q6NUP7 873 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 PRSS41Q7RTY9 318 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 SPPL2CQ8IUH8 684 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 PACRGLQ8N7B6 248 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 OR2L5Q8NG80 312 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 OR8J3Q8NGG0 315 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 HUS1BQ8NHY5 278 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ADAMTS17Q8TE56 1095 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 EME1Q96AY2 570 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 CMTM7Q96FZ5 175 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 VPS50Q96JG6 964 aa8.31□□□□□ -1.08
SMAD4-217ENST00000611848 ZBTB18Q99592 522 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms