RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 SYNDIG1LA6NDD5 238 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 CYR61O00622 381 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 TMPRSS11DO60235 418 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 PCDH7O60245 1069 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 CTNSO60931 367 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 LYPLA1O75608 230 aaPredicted RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 SNUPNO95149 360 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 RASAL1O95294 804 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 WDPCPO95876 746 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 CRYABP02511 175 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 IFNA16P05015 189 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 FGF4P08620 206 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 ICAM2P13598 275 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 MST1P26927 711 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 PPP2R1BP30154 601 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 CA7P43166 264 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 EFNA3P52797 238 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 WDR4P57081 412 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 AP2B1P63010 937 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 TBL3Q12788 808 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 ATG16L1Q676U5 607 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 PAPD4Q6PIY7 484 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 DCHS2Q6V1P9 2916 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 TWIST2Q8WVJ9 160 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 ZNF700Q9H0M5 742 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 PFDN4Q9NQP4 134 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 PNO1Q9NRX1 252 aaKnown RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 ATG4BQ9Y4P1 393 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 HIVEP1P15822 2718 aa16.49■□□□□ 0.23
MUC1-224ENST00000611577 SETD2Q9BYW2 2564 aaPredicted RBP16.49■□□□□ 0.23
MUC1-224ENST00000611577 SERTM1A2A2V5 107 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 A8MUA0 341 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 TMEM233B4DJY2 109 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 ITM2AO43736 263 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 LDB3O75112 727 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 SKAP2O75563 359 aaPredicted RBP16.48■□□□□ 0.23
MUC1-224ENST00000611577 SASH3O75995 380 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 RSL1D1O76021 490 aaKnown RBP16.48■□□□□ 0.23
MUC1-224ENST00000611577 LINC00032P0C843 101 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 TPP2P29144 1249 aaPredicted RBP16.48■□□□□ 0.23
MUC1-224ENST00000611577 HNRNPFP52597 415 aaKnown RBP16.48■□□□□ 0.23
MUC1-224ENST00000611577 RBPJQ06330 500 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 PCOLCEQ15113 449 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.48■□□□□ 0.23
MUC1-224ENST00000611577 BTBD16Q32M84 506 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 C18orf63Q68DL7 685 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 SCUBE1Q8IWY4 988 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 KIRREL3Q8IZU9 778 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 TMEM52Q8NDY8 209 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 C7orf57Q8NEG2 295 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 CDC26Q8NHZ8 85 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 SUN3Q8TAQ9 357 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 CHTF18Q8WVB6 975 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 DYDC1Q8WWB3 177 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 TANKQ92844 425 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 APIPQ96GX9 242 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 FAIM2Q9BWQ8 316 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 MCM8Q9UJA3 840 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 ITGB1BP2Q9UKP3 347 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 ASB4Q9Y574 426 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 DNAJC15Q9Y5T4 150 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 ZFHX3Q15911 3703 aa16.48■□□□□ 0.23
MUC1-224ENST00000611577 A0A1W2PQ72 361 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 TCRBV16S1A1N1A0A5B0 115 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 GLOD5A6NK44 160 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 PIP5K1BO14986 540 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 PROM1O43490 865 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 SEC22BO75396 215 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 AIFM1O95831 613 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 ITGAMP11215 1152 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 TNNI3P19429 210 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 TIA1P31483 386 aaKnown RBP eCLIP16.47■□□□□ 0.23
MUC1-224ENST00000611577 CASP6P55212 293 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 ID2Q02363 134 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 SERTAD2Q14140 314 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 EXT1Q16394 746 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 HSP90B2PQ58FF3 399 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 MRM1Q6IN84 353 aaKnown RBP16.47■□□□□ 0.23
MUC1-224ENST00000611577 RIPOR1Q6ZS17 1223 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 OR6Y1Q8NGX8 325 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 DNAJB8Q8NHS0 232 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 EBPLQ9BY08 206 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 ALOXE3Q9BYJ1 711 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 TRIM8Q9BZR9 551 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 RNF32Q9H0A6 362 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 LRTM1Q9HBL6 345 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 ZDHHC2Q9UIJ5 367 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 PTGDR2Q9Y5Y4 395 aa16.47■□□□□ 0.23
MUC1-224ENST00000611577 IGKV3D-11A0A0A0MRZ8 115 aa16.46■□□□□ 0.23
MUC1-224ENST00000611577 MYOCOSA0A1B0GUC4 107 aa16.46■□□□□ 0.23
MUC1-224ENST00000611577 A0A1W2PR48 441 aa16.46■□□□□ 0.23
MUC1-224ENST00000611577 OR5H15A6NDH6 313 aa16.46■□□□□ 0.23
MUC1-224ENST00000611577 PRAMEF2O60811 474 aa16.46■□□□□ 0.23
MUC1-224ENST00000611577 PRKRAO75569 313 aaKnown RBP16.46■□□□□ 0.23
MUC1-224ENST00000611577 ANXA4P09525 319 aaPredicted RBP16.46■□□□□ 0.23
MUC1-224ENST00000611577 COX7A2P14406 83 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms