RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 EIF3FO00303 357 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FZD6O60353 706 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 STX11O75558 287 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LATS1O95835 1130 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CD8BP10966 210 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OSMP13725 252 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TIMP2P16035 220 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CSNK2A2P19784 350 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PSMB5P28074 263 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DEFB103AP81534 67 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DUSP7Q16829 419 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF791Q3KP31 576 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR2G6Q5TZ20 316 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 WDR53Q7Z5U6 358 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LRRTM4Q86VH4 590 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DCUN1D3Q8IWE4 304 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TCEAL8Q8IYN2 117 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CADM2Q8N3J6 435 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ASCC1Q8N9N2 400 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM98AQ8NCA5 519 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR8K5Q8NH50 307 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LCN9Q8WX39 176 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PIGKQ92643 395 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ISG20Q96AZ6 181 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF689Q96CS4 500 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 NELL2Q99435 816 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DOK1Q99704 481 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TM9SF2Q99805 663 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 IFT27Q9BW83 186 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CNIH4Q9P003 139 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 NLKQ9UBE8 527 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TNFRSF10DQ9UBN6 386 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF639Q9UID6 485 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SATB2Q9UPW6 733 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ABHD14A-ACY1A0A1B0GW23 586 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 A0A1W2PQ09 198 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM86C2PA6NEL3 165 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 METTL15A6NJ78 407 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 WASH3PC4AMC7 463 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 FAAHO00519 579 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 AREL1O15033 823 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ORC5O43913 435 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 OR10H2O60403 315 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 RAB36O95755 333 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 DHFRP00374 187 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 YES1P07947 543 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 C6P13671 934 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 EIF2DP41214 584 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 VIPR2P41587 438 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 GPR4P46093 362 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 BTN3A2P78410 334 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 B4GALNT1Q00973 533 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 LARS2Q15031 903 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 KIAA0040Q15053 153 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SYPL1Q16563 259 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC27A4Q6P1M0 643 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 LIPIQ6XZB0 460 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CXXC5Q7LFL8 322 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 HORMAD2Q8N7B1 307 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 C12orf76Q8N812 135 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 NEIL3Q8TAT5 605 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TMEM106CQ9BVX2 250 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 PRR14Q9BWN1 585 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SPATA9Q9BWV2 254 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MED28Q9H204 178 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MRPL39Q9NYK5 338 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MBD1Q9UIS9 605 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF860A6NHJ4 632 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CHST10O43529 356 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 GMFGO60234 142 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 UGDHO60701 494 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CD160O95971 181 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ADAP00813 363 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MPIP34949 423 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SEC13P55735 322 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 RGS1Q08116 209 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 GGTA1PQ4G0N0 100 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF385BQ569K4 471 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TMEM107Q6UX40 140 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 VITQ6UXI7 678 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 B3GLCTQ6Y288 498 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 HTR3DQ70Z44 454 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 RBM45Q8IUH3 476 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC30A8Q8IWU4 369 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 LAX1Q8IWV1 398 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 Q8N402 240 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 VMP1Q96GC9 406 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SECISBP2Q96T21 854 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 IRF2BPLQ9H1B7 796 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 BRF2Q9HAW0 419 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 AKIP1Q9NQ31 210 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC52A3Q9NQ40 469 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CREBZFQ9NS37 354 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ING4Q9UNL4 249 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms