RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 TRPV6Q9H1D0 765 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 CARD9Q9H257 536 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 TUBB1Q9H4B7 451 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 GTSE1Q9NYZ3 720 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 NDUFA13Q9P0J0 144 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 TRIM10Q9UDY6 481 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 FETUBQ9UGM5 382 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 NARFQ9UHQ1 456 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 MRPS2Q9Y399 296 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 AUP1Q9Y679 476 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 ABCC9O60706 1549 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SPAG9O60271 1321 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 FGD5Q6ZNL6 1462 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 MACROD2A1Z1Q3 448 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC9B1P1A6NJY1 282 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF724A8MTY0 619 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 K7EQG2 157 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 CHEK1O14757 476 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 HPRP00739 348 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SFTPCP11686 197 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 RPS2P15880 293 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 FCARP24071 287 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 MTIF2P46199 727 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC1A6P48664 564 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 PITPNBP48739 271 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 HNRNPFP52597 415 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 LIMK2P53671 638 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SRP54P61011 504 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 CCZ1BP86790 482 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 CCZ1P86791 482 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 MAP2K1Q02750 393 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 CD300CQ08708 224 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 FCHO2Q0JRZ9 810 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ENPP2Q13822 863 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 P2RY14Q15391 338 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 SNAI3Q3KNW1 292 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 GPAT3Q53EU6 434 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 NKAIN2Q5VXU1 208 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF343Q6P1L6 599 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 DLEU7Q6UYE1 221 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 GPRIN3Q6ZVF9 776 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 OTUD6AQ7L8S5 288 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ITIH5Q86UX2 942 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ABHD12Q8N2K0 398 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 Q8N377 158 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 OR1B1Q8NGR6 318 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 EXOC6Q8TAG9 804 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 RAB39BQ96DA2 213 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 GPR137Q96N19 417 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 RUNDC3BQ96NL0 473 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 RUFY1Q96T51 708 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 DDX47Q9H0S4 455 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 HEXA-AS1Q9H8Q6 139 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 JPT2Q9H910 190 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 ANO10Q9NW15 660 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 PAK5Q9P286 719 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 IL19Q9UHD0 177 aa3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 DIMT1Q9UNQ2 313 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 RRP15Q9Y3B9 282 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 STRAPQ9Y3F4 350 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-213ENST00000609587 MEI4A8MW99 385 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 FAM25EA8MYX2 175 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 BOLA2-SMG1P6H3BVE0 249 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 OR6B1O95007 311 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 APBB3O95704 486 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 MBL2P11226 248 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 KRT5P13647 590 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 MARCKSP29966 332 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 HPDP32754 393 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 TNFRSF4P43489 277 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ACADSBP45954 432 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 CASP9P55211 416 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 CDKL1Q00532 357 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 EXOSC7Q15024 291 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 SIX1Q15475 284 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 POM121L1PQ3SYA9 428 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 FAM182AQ5T1J6 154 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 HIST2H2AA3Q6FI13 130 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 RAB12Q6IQ22 244 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 GALNT17Q6IS24 598 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 CDC42EP5Q6NZY7 148 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 MYPOPQ86VE0 399 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 PHC2Q8IXK0 858 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 BATF2Q8N1L9 274 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 LEMD2Q8NC56 503 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 CCNYQ8ND76 341 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 TMEM185AQ8NFB2 350 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF606Q8WXB4 792 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 RBM18Q96H35 190 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ATOH8Q96SQ7 321 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 DCTN5Q9BTE1 182 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ABCG8Q9H221 673 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 LIME1Q9H400 295 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC25A19Q9HC21 320 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 VPS54Q9P1Q0 977 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ERVK-18Q9QC07 812 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 COPS7AQ9UBW8 275 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 RARRES3Q9UL19 164 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms