RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 FUCA2Q9BTY2 467 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 LRRCC1Q9C099 1032 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 TMEM117Q9H0C3 514 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MMP28Q9H239 520 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 UBE2TQ9NPD8 197 aaPredicted RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 STARD5Q9NSY2 213 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 P2RX2Q9UBL9 471 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SNX6Q9UNH7 406 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MAB21L2Q9Y586 359 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CUX2O14529 1486 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 A0A1W2PR80 420 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 PCDH7O60245 1069 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF821O75541 412 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ANXA9O76027 345 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 STK17BO94768 372 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SNHG28P0DPA3 235 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 CLUP10909 449 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 PTGFRP43088 359 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZFP36L2P47974 494 aaKnown RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SLC1A6P48664 564 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 FOXG1P55316 489 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 PAX9P55771 341 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ERVFC1-1P60608 527 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SPIBQ01892 262 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 NFATC2Q13469 925 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 P2RY14Q15391 338 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZRSR1Q15695 479 aaKnown RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 HAGHQ16775 308 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 MAJINQ3KP22 176 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 USH1GQ495M9 461 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF672Q499Z4 452 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 LRRC23Q53EV4 343 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF311Q5JNZ3 666 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 DDI2Q5TDH0 399 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 CENPPQ6IPU0 288 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 NIPAL3Q6P499 406 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 CBLN3Q6UW01 205 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF730Q6ZMV8 503 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 DPY19L2P2Q6ZN68 376 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SLC26A9Q7LBE3 791 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 GPR142Q7Z601 462 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 LHFPL4Q7Z7J7 247 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SAMD14Q8IZD0 417 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 DCLK2Q8N568 766 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 VOPP1Q96AW1 172 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SLC25A36Q96CQ1 311 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 INPP4AQ96PE3 977 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 VPS35Q96QK1 796 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZSCAN5AQ9BUG6 496 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 PINK1Q9BXM7 581 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 NLNQ9BYT8 704 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 HOXD1Q9GZZ0 328 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 GORASP2Q9H8Y8 452 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 MTHFD2LQ9H903 347 aaPredicted RBP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF556Q9HAH1 456 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 COX16Q9P0S2 106 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 ATP6V1HQ9UI12 483 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 HPCAL4Q9UM19 191 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 B9D1Q9UPM9 204 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SLC6A5Q9Y345 797 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 RNF115Q9Y4L5 304 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 RNF215Q9Y6U7 377 aa3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 SF3B1O75533 1304 aaKnown RBP eCLIP3.59□□□□□ -1.83
AC004542.1-201ENST00000602955 MYO15BQ96JP2 1530 aa3.59□□□□□ -1.84
AC004542.1-201ENST00000602955 DCAF1Q9Y4B6 1507 aa3.59□□□□□ -1.84
AC004542.1-201ENST00000602955 A0A087WW49 117 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 C15orf61A6NNL5 157 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 SLCO1B7G3V0H7 640 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 BLOC1S5-TXNDC5H3BN57 136 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 XPO1O14980 1071 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 RHOBTB1O94844 696 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 SNX4O95219 450 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 IQCF3P0C7M6 154 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PRSS56P0CW18 603 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PPP2R1AP30153 589 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 TIMP3P35625 211 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 TRIM23P36406 574 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ACADVLP49748 655 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ABCE1P61221 599 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 RPL27P61353 136 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 RPS4XP62701 263 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PPIAP62937 165 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 IL24Q13007 206 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ITPK1Q13572 414 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 RBBP5Q15291 538 aaKnown RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PDK4Q16654 411 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PARP6Q2NL67 630 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 HKDC1Q2TB90 917 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ZNF699Q32M78 642 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 DCAF4L1Q3SXM0 396 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 CFAP157Q5JU67 520 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 DCAF12Q5T6F0 453 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 ASPHD2Q6ICH7 369 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 Q71RC1 249 aaPredicted RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 PTAR1Q7Z6K3 402 aaPredicted RBP3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 GPBP1Q86WP2 473 aa3.58□□□□□ -1.84
AC004542.1-201ENST00000602955 FAM131BQ86XD5 332 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms