RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 TGM7Q96PF1 710 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 FCRL4Q96PJ5 515 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 MAP3K3Q99759 626 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 PRRX2Q99811 253 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 SMURF2Q9HAU4 748 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 CCNB1IP1Q9NPC3 277 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 ADAM29Q9UKF5 820 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 BAG5Q9UL15 447 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 TP53BP1Q12888 1972 aaPredicted RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 TMEM131Q92545 1883 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 GOLGA4Q13439 2230 aaKnown RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 LY6G6EA0A0G2JKS1 128 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 URADA6NGE7 173 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 SLC1A7O00341 560 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 BCKDKO14874 412 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 FABP3P05413 133 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 KLK1P06870 262 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 COX7A2P14406 83 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 CD1CP29017 333 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 BSGP35613 385 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 HPCAL1P37235 193 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 PIGAP37287 484 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 CDKN2CP42773 168 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 DUSP3P51452 185 aaPredicted RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 GFERP55789 205 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 ITGA1P56199 1179 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 MVKQ03426 396 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 TGM3Q08188 693 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 ZNF763Q0D2J5 394 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 HYAL2Q12891 473 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 NEDD8Q15843 81 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 TSPYL5Q86VY4 417 aaPredicted RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 ZC3H7AQ8IWR0 971 aaKnown RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 OR2L5Q8NG80 312 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 GOT1L1Q8NHS2 421 aaPredicted RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 NT5CQ8TCD5 201 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 MS4A6EQ96DS6 147 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 TM4SF19Q96DZ7 209 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 EGLN2Q96KS0 407 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 KCNC2Q96PR1 638 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 APOL4Q9BPW4 351 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 MACROD1Q9BQ69 325 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 SLC6A16Q9GZN6 736 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 CHRNA10Q9GZZ6 450 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 LIN28AQ9H9Z2 209 aaKnown RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 FANCEQ9HB96 536 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 FAF1Q9UNN5 650 aaPredicted RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 WBP11Q9Y2W2 641 aaKnown RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 TPRKBQ9Y3C4 175 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 PCDHGB2Q9Y5G2 931 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 MAGED1Q9Y5V3 778 aaPredicted RBP11.06□□□□□ -0.64
VRK3-223ENST00000601341 U3KQA8 63 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 HEATR5BQ9P2D3 2071 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 GPR179Q6PRD1 2367 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
VRK3-223ENST00000601341 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 A8MVJ9 347 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 E9PQ18 207 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 H0YGG7 62 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 ERI3O43414 337 aaKnown RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 PRAMEF10O60809 474 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 ZBTB11O95625 1053 aaPredicted RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 INHBBP09529 407 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 POLR2IP36954 125 aaKnown RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 TSFMP43897 325 aaKnown RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 PLA2G16P53816 162 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 ARF3P61204 181 aaPredicted RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 SQSTM1Q13501 440 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 INAVAQ3KP66 663 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 TOR1AIP1Q5JTV8 583 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 MANEAQ5SRI9 462 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 OR4C11Q6IEV9 310 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 FRMPD2BQ6IN97 320 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 GUSBP11Q6P575 273 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 TRIM40Q6P9F5 258 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 WDR74Q6RFH5 385 aaPredicted RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 USP53Q70EK8 1073 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 UBE3DQ7Z6J8 389 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 PTOV1Q86YD1 416 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 ANKRD13BQ86YJ7 626 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 TBC1D15Q8TC07 691 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 NODALQ96S42 347 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 EPYCQ99645 322 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 C17orf62Q9BQA9 187 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 CCDC3Q9BQI4 270 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 DUSP26Q9BV47 211 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 NLNQ9BYT8 704 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 BHLHE41Q9C0J9 482 aaPredicted RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 KLHL31Q9H511 634 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 DUSP21Q9H596 190 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 DDX31Q9H8H2 851 aaKnown RBP11.05□□□□□ -0.64
VRK3-223ENST00000601341 SYNPO2LQ9H987 977 aa11.05□□□□□ -0.64
VRK3-223ENST00000601341 TBC1D23Q9NUY8 699 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms