RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 EMC8O43402 210 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 B4GALT2O60909 372 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 SERPINA1P01009 418 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FCGR1AP12314 374 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 PORP16435 677 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CASP9P55211 416 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 DSTNP60981 165 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TRIP10Q15642 601 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF630Q2M218 657 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 SLC30A8Q8IWU4 369 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 GPR135Q8IZ08 494 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM102Q8N9M5 508 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 OR56A1Q8NGH5 318 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 LRTOMTQ8WZ04 291 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ELP4Q96EB1 424 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 SEPHS2Q99611 448 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CUTCQ9NTM9 273 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ZCCHC3Q9NUD5 404 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 THUMPD1Q9NXG2 353 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 SAMD4AQ9UPU9 718 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 SCN3AQ9NY46 2000 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 VCANP13611 3396 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TIPRLO75663 272 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FHP07954 510 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 RAP2AP10114 183 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CPMP14384 443 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ITGA1P56199 1179 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 PRR5P85299 388 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FOLH1Q04609 750 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CHRNB3Q05901 458 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TP53BP2Q13625 1128 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 YOD1Q5VVQ6 348 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CEACAM20Q6UY09 585 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 DBX2Q6ZNG2 339 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ERMP1Q7Z2K6 904 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TMPRSS9Q7Z410 1059 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ARHGAP22Q7Z5H3 698 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 OR4N5Q8IXE1 308 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM52Q8NDY8 209 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 OR9A2Q8NGT5 310 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 OR1L3Q8NH93 324 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FBXO30Q8TB52 745 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ZFAND2BQ8WV99 257 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 MAL2Q969L2 176 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 TBC1D20Q96BZ9 403 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 MVB12AQ96EY5 273 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 MMABQ96EY8 250 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 VCXQ9H320 206 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FANCEQ9HB96 536 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 RPS6KA6Q9UK32 745 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 ARID1BQ8NFD5 2236 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 PRKD3O94806 890 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 ARAFP10398 606 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 FASP25445 335 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 PPP2R1BP30154 601 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 GRK6P43250 576 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 ANXA11P50995 505 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 ROR2Q01974 943 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 EEF1A2Q05639 463 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 COL9A2Q14055 689 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 SCARB2Q14108 478 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 INTS11Q5TA45 600 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 LAIR1Q6GTX8 287 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM107Q6UX40 140 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 HORMAD2Q8N7B1 307 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 SLC35G5Q96KT7 338 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 RNF145Q96MT1 663 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 CHID1Q9BWS9 393 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 MAGIXQ9H6Y5 334 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 HCN3Q9P1Z3 774 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 MRPS33Q9Y291 106 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 NUP214P35658 2090 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-224ENST00000600718 PEX1O43933 1283 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 FGF17O60258 216 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 CAPNS1P04632 268 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 ARSFP54793 590 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 TXNL4AP83876 142 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 CDK6Q00534 326 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 OGFRL1Q5TC84 451 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 EGFL6Q8IUX8 553 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF595Q8IYB9 648 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 FAM110BQ8TC76 370 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 COL26A1Q96A83 441 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF501Q96CX3 271 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 PYURFQ96I23 114 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 MAGED4Q96JG8 741 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 NDC1Q9BTX1 674 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 ASPSCR1Q9BZE9 553 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 KLHL4Q9C0H6 718 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 A4GALTQ9NPC4 353 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 C11orf16Q9NQ32 467 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 PAPOLBQ9NRJ5 636 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 FGF21Q9NSA1 209 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 ETAA1Q9NY74 926 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 NTMQ9P121 344 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 CDC14AQ9UNH5 594 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms