RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PRSS53Q2L4Q9 553 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ACSM2BQ68CK6 577 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 HSDL2Q6YN16 418 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 FAR1Q8WVX9 515 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 SREK1Q8WXA9 508 aaKnown RBP14.62□□□□□ -0.07
RPS28-203ENST00000600659 CNRIP1Q96F85 164 aaPredicted RBP14.62□□□□□ -0.07
RPS28-203ENST00000600659 PELOQ9BRX2 385 aaKnown RBP14.62□□□□□ -0.07
RPS28-203ENST00000600659 CLMPQ9H6B4 373 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 WDR41Q9HAD4 459 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 CXorf21Q9HAI6 301 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ABI3Q9P2A4 366 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 MYOTQ9UBF9 498 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 EXO1Q9UQ84 846 aaKnown RBP14.62□□□□□ -0.07
RPS28-203ENST00000600659 ERVK-19Q9WJR5 959 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 DNAJC15Q9Y5T4 150 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ACTL7BQ9Y614 415 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 LRRK2Q5S007 2527 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 PTPN13Q12923 2485 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 ASPDHA6ND91 283 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 CTIFO43310 598 aaKnown RBP14.61□□□□□ -0.07
RPS28-203ENST00000600659 OR2J2O76002 312 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 RSL1D1O76021 490 aaKnown RBP14.61□□□□□ -0.07
RPS28-203ENST00000600659 ZIC2O95409 532 aaPredicted RBP14.61□□□□□ -0.07
RPS28-203ENST00000600659 NADKO95544 446 aaPredicted RBP14.61□□□□□ -0.07
RPS28-203ENST00000600659 FGF4P08620 206 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 COX7A2P14406 83 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 TNNI3P19429 210 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 S1PR1P21453 382 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 SERPINB4P48594 390 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 SLC37A1P57057 533 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 SRSF11Q05519 484 aaKnown RBP14.61□□□□□ -0.07
RPS28-203ENST00000600659 BTKQ06187 659 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 MGAT2Q10469 447 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 NR6A1Q15406 480 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 FAM180BQ6P0A1 224 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 C7orf57Q8NEG2 295 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 OR4K14Q8NGD5 310 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 C16orf78Q8WTQ4 265 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 FCRL1Q96LA6 429 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 RASL10BQ96S79 203 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 LRFN1Q9P244 771 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 DLGAP4Q9Y2H0 992 aa14.61□□□□□ -0.07
RPS28-203ENST00000600659 COL12A1Q99715 3063 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 SP1P08047 785 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 PIK3R1P27986 724 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 SSTR4P31391 388 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 PTGER1P34995 402 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 CYB561P49447 251 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 XKP51811 444 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 FUT7Q11130 342 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 DUSP8Q13202 625 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 ZNF267Q14586 743 aaPredicted RBP14.6□□□□□ -0.07
RPS28-203ENST00000600659 EBPQ15125 230 aaKnown RBP14.6□□□□□ -0.07
RPS28-203ENST00000600659 CEBPEQ15744 281 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 LYPD8Q6UX82 237 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 MDGA2Q7Z553 956 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 ZNF615Q8N8J6 731 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 ZNF441Q8N8Z8 693 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 SIMC1Q8NDZ2 872 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 NUBPLQ8TB37 319 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 RIT1Q92963 219 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 RBM18Q96H35 190 aaKnown RBP14.6□□□□□ -0.07
RPS28-203ENST00000600659 CNPPD1Q9BV87 410 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 C20orf27Q9GZN8 174 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 KLHL1Q9NR64 748 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 MAT2BQ9NZL9 334 aa14.6□□□□□ -0.07
RPS28-203ENST00000600659 YARS2Q9Y2Z4 477 aaKnown RBP14.6□□□□□ -0.07
RPS28-203ENST00000600659 POLR3HQ9Y535 204 aaPredicted RBP14.6□□□□□ -0.07
RPS28-203ENST00000600659 WWP2O00308 870 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 FCHO1O14526 889 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 TM9SF1O15321 606 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 ITM2AO43736 263 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 NME2P1O60361 137 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 OR10H2O60403 315 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 GUCY1B2O75343 617 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 VPS4BO75351 444 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 SLC25A12O75746 678 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 OR6B1O95007 311 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 ATP1B1P05026 303 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 NME2P22392 152 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 TACR1P25103 407 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 MST1P26927 711 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 SERPINB5P36952 375 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 FEN1P39748 380 aaKnown RBP14.59□□□□□ -0.07
RPS28-203ENST00000600659 SOX3P41225 446 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 OC90Q02509 493 aaPredicted RBP14.59□□□□□ -0.07
RPS28-203ENST00000600659 ZNF763Q0D2J5 394 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 ASPHQ12797 758 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 PRICKLE4Q2TBC4 344 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 XKR7Q5GH72 579 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 FAM71E1Q6IPT2 247 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 GALNTL5Q7Z4T8 443 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 ATCAYQ86WG3 371 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 BCORP1Q8N888 145 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 ST6GALNAC3Q8NDV1 305 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 SUN3Q8TAQ9 357 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 TWIST2Q8WVJ9 160 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 NR4A3Q92570 626 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 CTHRC1Q96CG8 243 aa14.59□□□□□ -0.07
RPS28-203ENST00000600659 KLHL29Q96CT2 875 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms