RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 KCNE4Q8WWG9 221 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 N4BP2L2Q92802 583 aaPredicted RBP9.82□□□□□ -0.84
SMG9-207ENST00000598860 RERGQ96A58 199 aaPredicted RBP9.82□□□□□ -0.84
SMG9-207ENST00000598860 C19orf60Q96EN9 201 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 METTL2AQ96IZ6 378 aaKnown RBP9.82□□□□□ -0.84
SMG9-207ENST00000598860 SERPINI1Q99574 410 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 SPNS1Q9H2V7 528 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 FANCEQ9HB96 536 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 PNPOQ9NVS9 261 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 CDC42EP3Q9UKI2 254 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 PILRAQ9UKJ1 303 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 ZNF490Q9ULM2 529 aaPredicted RBP9.82□□□□□ -0.84
SMG9-207ENST00000598860 PLCL2Q9UPR0 1127 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 FIS1Q9Y3D6 152 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 TIMM22Q9Y584 194 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 DNAJC15Q9Y5T4 150 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 USH1CQ9Y6N9 552 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 SCN2AQ99250 2005 aa9.82□□□□□ -0.84
SMG9-207ENST00000598860 AHCTF1Q8WYP5 2266 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 PTPRQQ9UMZ3 2332 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 A0A0J9YVX5 310 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 A0A1W2PR48 441 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 NVLO15381 856 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 KLK10O43240 276 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 RGS14O43566 566 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 KIF1CO43896 1103 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 SKAP2O75563 359 aaPredicted RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 RSL1D1O76021 490 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 SEMA3DO95025 777 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 HRGP04196 525 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 SERPINA6P08185 405 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 KITP10721 976 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 SLC5A2P31639 672 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 CSTF2P33240 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG9-207ENST00000598860 MAPK10P53779 464 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 STXBP1P61764 594 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 MEF2AQ02078 507 aaPredicted RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 TGM3Q08188 693 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 CUL3Q13618 768 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 PDCD2Q16342 344 aaPredicted RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 IMPG1Q17R60 797 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 XKR7Q5GH72 579 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 NIPAL1Q6NVV3 410 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 ASPGQ86U10 573 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 DDIASQ8IXT1 998 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 DNAJC22Q8N4W6 341 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 FAM156AQ8NDB6 213 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 SRFBP1Q8NEF9 429 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 OR8K5Q8NH50 307 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 HUS1BQ8NHY5 278 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 NT5CQ8TCD5 201 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 ZNF473Q8WTR7 871 aaKnown RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 CMTM7Q96FZ5 175 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 PPP3R2Q96LZ3 170 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 PPM1MQ96MI6 270 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 OR2A5Q96R48 311 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 KCNA7Q96RP8 456 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 MEAF6Q9HAF1 191 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 TMEM9Q9P0T7 183 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 MARCOQ9UEW3 520 aaPredicted RBP9.81□□□□□ -0.84
SMG9-207ENST00000598860 KLHL20Q9Y2M5 609 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 SPEGQ15772 3267 aa9.81□□□□□ -0.84
SMG9-207ENST00000598860 KRTAP4-8A0A0G2JLE6 195 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 FEZF1A0PJY2 475 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 A8MU76 341 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 MAGEB17A8MXT2 336 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 TMEM233B4DJY2 109 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 PIP5K1BO14986 540 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 ZSCAN9O15535 394 aaPredicted RBP9.8□□□□□ -0.84
SMG9-207ENST00000598860 CTSVO60911 334 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 FAM107AO95990 144 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 PDYNP01213 254 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 ITIH1P19827 911 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 PRPH2P23942 346 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 CTSSP25774 331 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 ETV5P41161 510 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 GABRA4P48169 554 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 HTR6P50406 440 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 SEC24CP53992 1094 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 SKP1P63208 163 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 TLE3Q04726 772 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 BTKQ06187 659 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 MAD2L1Q13257 205 aaPredicted RBP9.8□□□□□ -0.84
SMG9-207ENST00000598860 DDX39BQ13838 428 aaKnown RBP9.8□□□□□ -0.84
SMG9-207ENST00000598860 ZIC1Q15915 447 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 SMU1Q2TAY7 513 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 TMEM35AQ53FP2 167 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 GARNL3Q5VVW2 1013 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 FBXO42Q6P3S6 717 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 FAM180AQ6UWF9 173 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 ANKRD53Q8N9V6 530 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 ZNF740Q8NDX6 193 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 SLC13A3Q8WWT9 602 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 MAELQ96JY0 434 aaKnown RBP9.8□□□□□ -0.84
SMG9-207ENST00000598860 ZNF285Q96NJ3 590 aa9.8□□□□□ -0.84
SMG9-207ENST00000598860 MS4A8Q9BY19 250 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms