RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 C11orf24Q96F05 449 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 EPN3Q9H201 632 aa11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 MYNNQ9NPC7 610 aa11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 POLR3HQ9Y535 204 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-216ENST00000598587 LSM1O15116 133 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 DDAH2O95865 285 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ATP1B1P05026 303 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 DDCP20711 480 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 NT5EP21589 574 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 BGNP21810 368 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 NTSP30990 170 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ASMTP46597 345 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 SSR4P51571 173 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 MLF1P58340 268 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ERVK-8P63133 956 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 RPL38P63173 70 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 OC90Q02509 493 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 TLE1Q04724 770 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 MPP2Q14168 576 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 FAM219BQ5XKK7 198 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 GPALPP1Q8IXQ4 340 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ARMC10Q8N2F6 343 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 VWA5B2Q8N398 1253 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 TMEM156Q8N614 296 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 FAM98AQ8NCA5 519 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ZNF721Q8TF20 911 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 THAP3Q8WTV1 239 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 PPWD1Q96BP3 646 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 SENP5Q96HI0 755 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 C5orf34Q96MH7 638 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 TUBB1Q9H4B7 451 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ZDHHC2Q9UIJ5 367 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 ERVK-19Q9WJR5 959 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 YARS2Q9Y2Z4 477 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 PTGDR2Q9Y5Y4 395 aa11.22□□□□□ -0.61
ARHGEF1-216ENST00000598587 PRAMEF2O60811 474 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 ITGA10O75578 1167 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 LYPLA1O75608 230 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 PLA2G2AP14555 144 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CD46P15529 392 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 MPIP34949 423 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 RPL3P39023 403 aaKnown RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CYB561P49447 251 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 RPL14P50914 215 aaKnown RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 GPR143P51810 404 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 RNF4P78317 190 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 C2orf80Q0P641 193 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 TUBA3CQ13748 450 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 ZNF267Q14586 743 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 UGT3A2Q3SY77 523 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 XKR7Q5GH72 579 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 RPUSD3Q6P087 351 aaKnown RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 TUBA3EQ6PEY2 450 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 FAM180AQ6UWF9 173 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 OR7G1Q8NGA0 311 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 NUBPLQ8TB37 319 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 SLC22A8Q8TCC7 542 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 DYDC1Q8WWB3 177 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 ASB15Q8WXK1 588 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 EXOSC8Q96B26 276 aaKnown RBP11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 TUBGCP3Q96CW5 907 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 BBS4Q96RK4 519 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 SH3GL2Q99962 352 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 BRINP2Q9C0B6 783 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 THAP1Q9NVV9 213 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 PLA2G3Q9NZ20 509 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 LUZP4Q9P127 313 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 LRFN1Q9P244 771 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 MYOTQ9UBF9 498 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CES1P1Q9UKY3 287 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CFL2Q9Y281 166 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CCL27Q9Y4X3 112 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 SPTA1P02549 2419 aa11.21□□□□□ -0.61
ARHGEF1-216ENST00000598587 CFAP46Q8IYW2 2715 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 A8MVJ9 347 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 J3QKU1 62 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 ITM2AO43736 263 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 VPS4BO75351 444 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 BCAS2O75934 225 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 SLITRK5O94991 958 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 F10P00742 488 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 IGKV3-11P04433 115 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 ARRB2P32121 409 aa11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-216ENST00000598587 HPCAL1P37235 193 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms