RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNF180Q9UJW8 692 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 ADGRG4Q8IZF6 3080 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 A8MT66 165 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 FAM166BA8MTA8 275 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 KLRC4-KLRK1H3BQV0 150 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 STX16-NPEPL1H3BU86 382 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 FOXE1O00358 373 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CDK2AP1O14519 115 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 STX16O14662 325 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 PGRMC2O15173 223 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 PDE9AO76083 593 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 MLYCDO95822 493 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 AIFM1O95831 613 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 NR2F6P10588 404 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ESRRAP11474 423 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 COL6A2P12110 1019 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ALOX15P16050 662 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CNTFP26441 200 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 TLX1P31314 330 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 BUD31P41223 144 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 SLC18A1P54219 525 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CASP6P55212 293 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 HERVK_113P63132 956 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ERVK-8P63133 956 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ASPHQ12797 758 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CUL3Q13618 768 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CDSNQ15517 529 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CMPK2Q5EBM0 449 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 FRG2Q64ET8 278 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 Q6ZPB1 254 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 TMEM151AQ8N4L1 468 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 OR4F6Q8NGB9 312 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 OR52N2Q8NGI0 321 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 AGAP11Q8TF27 550 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 TANKQ92844 425 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 FRG2BQ96QU4 278 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 CNPPD1Q9BV87 410 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ERVK-6Q9BXR3 956 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 MRPL1Q9BYD6 325 aaKnown RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 DDX31Q9H8H2 851 aaKnown RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 LYARQ9NX58 379 aaKnown RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 TEX10Q9NXF1 929 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-203ENST00000598359 MS4A12Q9NXJ0 267 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 COPS7AQ9UBW8 275 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 ERVK-19Q9WJR5 959 aa12.74□□□□□ -0.37
SCAF1-203ENST00000598359 APCP25054 2843 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 SYNDIG1LA6NDD5 238 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 FOXO6A8MYZ6 492 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 GOLGA8RI6L899 631 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 OR10H2O60403 315 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 GPR75O95800 540 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 IGKV3-11P04433 115 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 KLK1P06870 262 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 RPS17P08708 135 aaKnown RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 COX7A2P14406 83 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 CHN1P15882 459 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 PLIN5Q00G26 463 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF267Q14586 743 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 METTL2BQ6P1Q9 378 aaKnown RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 NUDT13Q86X67 352 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 DOLPP1Q86YN1 238 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 ZFP62Q8NB50 900 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 POGLUT1Q8NBL1 392 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 OR2M7Q8NG81 312 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF483Q8TF39 744 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 HBEGFQ99075 208 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 SERPINI1Q99574 410 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 NTMT1Q9BV86 223 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 TMEM216Q9P0N5 145 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-203ENST00000598359 TMCO1Q9UM00 188 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 MED13LQ71F56 2210 aa12.73□□□□□ -0.37
SCAF1-203ENST00000598359 ERICH4A6NGS2 130 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 FAM107AO95990 144 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 PDYNP01213 254 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 CCL3P10147 92 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 PRF1P14222 555 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 IFT88Q13099 833 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 TCHHL1Q5QJ38 904 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-203ENST00000598359 ST13P4Q8IZP2 240 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-203ENST00000598359 MMP21Q8N119 569 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF808Q8N4W9 903 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-203ENST00000598359 OR5L2Q8NGL0 311 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 OR8K3Q8NH51 312 aa12.72□□□□□ -0.37
SCAF1-203ENST00000598359 C16orf52Q8NHV5 167 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms