RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 CLMPQ9H6B4 373 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 KCNK9Q9NPC2 374 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 AGPAT4Q9NRZ5 378 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 HEY2Q9UBP5 337 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 ERVK-19Q9WJR5 959 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 DLGAP4Q9Y2H0 992 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
UPF1-205ENST00000598209 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
UPF1-205ENST00000598209 WDR91A4D1P6 747 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TCP11X1B4DZS4 312 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 WWP2O00308 870 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 RGS14O43566 566 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 ERAL1O75616 437 aaKnown RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 OR2J2O76002 312 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 NEURL1O76050 574 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 ZWINTO95229 277 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 RASAL1O95294 804 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 FGF4P08620 206 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 ANXA4P09525 319 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 DRD2P14416 443 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 CD46P15529 392 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 GNLYP22749 145 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 ARRB2P32121 409 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 SSR4P51571 173 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 HK2P52789 917 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 ZNF227Q86WZ6 799 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 CLYBLQ8N0X4 340 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 OR5L2Q8NGL0 311 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 OR6Y1Q8NGX8 325 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 AGR3Q8TD06 166 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 SCMH1Q96GD3 660 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TAAR6Q96RI8 345 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 STMN4Q9H169 189 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TRIM45Q9H8W5 580 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.86□□□□□ -0.35
UPF1-205ENST00000598209 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 TRAF6Q9Y4K3 522 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 POLR3HQ9Y535 204 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
UPF1-205ENST00000598209 RP1L1Q8IWN7 2480 aaPredicted RBP12.86□□□□□ -0.35
UPF1-205ENST00000598209 NPIPB8E9PQR5 432 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 BIRC5O15392 142 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 SEC22BO75396 215 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 SLC25A12O75746 678 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 SP1P08047 785 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CT62P0C5K7 136 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 LINC00032P0C843 101 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 NEFHP12036 1026 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CSNK2A2P19784 350 aaPredicted RBP12.85□□□□□ -0.35
UPF1-205ENST00000598209 NT5EP21589 574 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 PRPH2P23942 346 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 FEN1P39748 380 aaKnown RBP12.85□□□□□ -0.35
UPF1-205ENST00000598209 GSTM5P46439 218 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 SLC37A1P57057 533 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 ZNF763Q0D2J5 394 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 MPP2Q14168 576 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CASP8Q14790 479 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 HEPACAMQ14CZ8 416 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 NR6A1Q15406 480 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 UGT3A2Q3SY77 523 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 C6orf163Q5TEZ5 329 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 Q6ZSR9 355 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 GALNT12Q8IXK2 581 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CYP4Z2PQ8N1L4 340 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 TMEM178AQ8NBL3 297 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 FAM76AQ8TAV0 307 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 NUBPLQ8TB37 319 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 ASB15Q8WXK1 588 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 TMEM125Q96AQ2 219 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 CNRIP1Q96F85 164 aaPredicted RBP12.85□□□□□ -0.35
UPF1-205ENST00000598209 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
UPF1-205ENST00000598209 RASL10BQ96S79 203 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 LRTM1Q9HBL6 345 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 TMBIM4Q9HC24 238 aa12.85□□□□□ -0.35
UPF1-205ENST00000598209 UTS2RQ9UKP6 389 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms