RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SLC30A8Q8IWU4 369 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF555Q8NEP9 628 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ZFP28Q8NHY6 868 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 NRBF2Q96F24 287 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 OTUB1Q96FW1 271 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF681Q96N22 645 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 EPB41L1Q9H4G0 881 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 KCMF1Q9P0J7 381 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 PCDHGA8Q9Y5G5 932 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 A0A0J9YY10 115 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 LOC100130705A0A1B0GUX0 176 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 J3KTA2 159 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 IFNA14P01570 189 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 FUT4P22083 530 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 PRKAG1P54619 331 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 MAZP56270 477 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 RUNX2Q13950 521 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 THAP5Q7Z6K1 395 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 C8orf59Q8N0T1 100 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 C10orf90Q96M02 699 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 EPYCQ99645 322 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ANKRA2Q9H9E1 313 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ENTPD4Q9Y227 616 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 SH3GLB1Q9Y371 365 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 SMIM31A0A1B0GVY4 71 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 OR5K3A6NET4 321 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TRIM64CA6NLI5 447 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 C5orf58C9J3I9 102 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 B4GAT1O43505 415 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 HCRTR1O43613 425 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 C9P02748 559 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 EIF2S1P05198 315 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 NR2F6P10588 404 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CSNK2A2P19784 350 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CD38P28907 300 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 RAD23AP54725 363 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 SYPL1Q16563 259 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CNPY1Q3B7I2 92 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZC3H12BQ5HYM0 836 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TMEM107Q6UX40 140 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 OLIG3Q7RTU3 272 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ARMC8Q8IUR7 673 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 PIK3C3Q8NEB9 887 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TMIGD2Q96BF3 282 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF300Q96RE9 604 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 YIPF4Q9BSR8 244 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 THSD1Q9NS62 852 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF451Q9Y4E5 1061 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 PCDHGB3Q9Y5G1 929 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 LYVE1Q9Y5Y7 322 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CSF2P04141 144 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CD247P20963 164 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ALDH3B2P48448 385 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TUBA4AP68366 448 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 OLR1P78380 273 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 IL1RL1Q01638 556 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 SUZ12Q15022 739 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CEBPEQ15744 281 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CTU2Q2VPK5 515 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 RFX4Q33E94 735 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF528Q3MIS6 628 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 FAHD1Q6P587 224 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TMEM64Q6YI46 380 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 RBM44Q6ZP01 1051 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 RNF44Q7L0R7 432 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CAMKVQ8NCB2 501 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 GPR32P1Q8NGA4 272 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 OR9A2Q8NGT5 310 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 XAGE5Q8WWM1 108 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 GEMIN6Q8WXD5 167 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 THAP11Q96EK4 314 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 CSF3RQ99062 836 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 RBM38Q9H0Z9 239 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 EXD2Q9NVH0 621 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZSCAN32Q9NX65 697 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 TRPC4Q9UBN4 977 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ORC6Q9Y5N6 252 aa16.06■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF860A6NHJ4 632 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 SLC16A6O15403 523 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 MFN2O95140 757 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 BMP10O95393 424 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 SP9P0CG40 484 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 CYP4B1P13584 511 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 IL7RP16871 459 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 MATN1P21941 496 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 LIM2P55344 173 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 TNFRSF17Q02223 184 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 RELAQ04206 551 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 LTB4RQ15722 352 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 WDR5BQ86VZ2 330 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 FAM174AQ8TBP5 190 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 APOBEC4Q8WW27 367 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 SERINC2Q96SA4 455 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 ING2Q9H160 280 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 RIBC2Q9H4K1 309 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms