RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ZNF324BQ6AW86 544 aaPredicted RBP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 SLC25A25Q6KCM7 469 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ZCCHC23Q6ZST2 131 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 TMEM156Q8N614 296 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 BCORP1Q8N888 145 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 OR5L2Q8NGL0 311 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 OR6Y1Q8NGX8 325 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 DOK4Q8TEW6 326 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 SREK1Q8WXA9 508 aaKnown RBP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 FAIM2Q9BWQ8 316 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 CXorf21Q9HAI6 301 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 RRAGDQ9NQL2 400 aaPredicted RBP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 KLHL1Q9NR64 748 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 HEY2Q9UBP5 337 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 PSME2Q9UL46 239 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 DLGAP4Q9Y2H0 992 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ACTL7BQ9Y614 415 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ESPL1Q14674 2120 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 WWP2O00308 870 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 SLC25A12O75746 678 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 IL3P08700 152 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 ANXA4P09525 319 aaPredicted RBP15.52■□□□□ 0.08
SSBP4-204ENST00000597724 CPMP14384 443 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 DRD2P14416 443 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 PORP16435 677 aaPredicted RBP15.52■□□□□ 0.08
SSBP4-204ENST00000597724 SSR4P51571 173 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 ERVK-8P63133 956 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 MRPL49Q13405 166 aaKnown RBP15.52■□□□□ 0.08
SSBP4-204ENST00000597724 KANK2Q63ZY3 851 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 RNF165Q6ZSG1 346 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 C9orf40Q8IXQ3 194 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 TMEM178AQ8NBL3 297 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 DNAJB8Q8NHS0 232 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 C16orf78Q8WTQ4 265 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 C5orf34Q96MH7 638 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 SLX1AQ9BQ83 275 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 CNPPD1Q9BV87 410 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 EML4Q9HC35 981 aaKnown RBP15.52■□□□□ 0.08
SSBP4-204ENST00000597724 OLAHQ9NV23 265 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.52■□□□□ 0.088e-10■■■■■ 54.2
SSBP4-204ENST00000597724 ERVK-19Q9WJR5 959 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 DNAJC15Q9Y5T4 150 aa15.52■□□□□ 0.08
SSBP4-204ENST00000597724 LRRK2Q5S007 2527 aa15.52■□□□□ 0.07
SSBP4-204ENST00000597724 USP9XQ93008 2570 aaPredicted RBP15.51■□□□□ 0.07
SSBP4-204ENST00000597724 GOLGA6L10A6NI86 522 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 NPIPB8E9PQR5 432 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 NME2P1O60361 137 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 ERAL1O75616 437 aaKnown RBP15.51■□□□□ 0.07
SSBP4-204ENST00000597724 RSL1D1O76021 490 aaKnown RBP15.51■□□□□ 0.07
SSBP4-204ENST00000597724 CRYABP02511 175 aaKnown RBP15.51■□□□□ 0.07
SSBP4-204ENST00000597724 NME2P22392 152 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 PRPH2P23942 346 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 ARRB2P32121 409 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 SERPINB5P36952 375 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 GSTM5P46439 218 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 SERPINB4P48594 390 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 ALDH9A1P49189 494 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 SLC37A1P57057 533 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 MPP2Q14168 576 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 MAPKAPK3Q16644 382 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 UGT3A2Q3SY77 523 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 RNF111Q6ZNA4 994 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 Q6ZSR9 355 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 GALNTL5Q7Z4T8 443 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 NUDCD3Q8IVD9 361 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 HOMEZQ8IX15 550 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 GALNT12Q8IXK2 581 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 CLYBLQ8N0X4 340 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 CYP4Z2PQ8N1L4 340 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 ST6GALNAC3Q8NDV1 305 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 FAM76AQ8TAV0 307 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 NUBPLQ8TB37 319 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 TMEM125Q96AQ2 219 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 METTL2AQ96IZ6 378 aaKnown RBP15.51■□□□□ 0.07
SSBP4-204ENST00000597724 RASL10BQ96S79 203 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 TUBB1Q9H4B7 451 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 FIS1Q9Y3D6 152 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 TRAF6Q9Y4K3 522 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 SVILO95425 2214 aa15.51■□□□□ 0.07
SSBP4-204ENST00000597724 CROCCQ5TZA2 2017 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CLEC18AA5D8T8 446 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ANKUB1A6NFN9 424 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 OR6C76A6NM76 312 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 TMEM233B4DJY2 109 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 SLC28A1O00337 649 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 TM9SF1O15321 606 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF354AO60765 605 aaPredicted RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 SEC22BO75396 215 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ZIC2O95409 532 aaPredicted RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CHEK2O96017 543 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CLPSP04118 112 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ATP1B1P05026 303 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CT62P0C5K7 136 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 MYZAPP0CAP1 466 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 EDN3P14138 238 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CSNK2A2P19784 350 aaPredicted RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 FEN1P39748 380 aaKnown RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 PMP22Q01453 160 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 FUT7Q11130 342 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 HEPACAMQ14CZ8 416 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms