RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 KCNK5O95279 499 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 KLK3P07288 261 aaPredicted RBP13.76□□□□□ -0.21
VRK3-212ENST00000596814 NQO1P15559 274 aaKnown RBP13.76□□□□□ -0.21
VRK3-212ENST00000596814 BTG2P78543 158 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 OCA2Q04671 838 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 STX4Q12846 297 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 VWA2Q5GFL6 755 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 QSOX2Q6ZRP7 698 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 OR9A2Q8NGT5 310 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 PSMA8Q8TAA3 256 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 CLPTM1LQ96KA5 538 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 SH3GL1Q99961 368 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 SLC35A5Q9BS91 424 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 TRIM4Q9C037 500 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 C14orf105Q9NVL8 296 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 CMTM6Q9NX76 183 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 PCDHGA3Q9Y5H0 932 aa13.76□□□□□ -0.21
VRK3-212ENST00000596814 KNTC1P50748 2209 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 RNF103-CHMP3A0A140T963 221 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 TGFBR3LH3BV60 316 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 NME4O00746 187 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 OR10H2O60403 315 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 STK17BO94768 372 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 ATP1B1P05026 303 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 MAOAP21397 527 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 UQCRC2P22695 453 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 PPIBP23284 216 aaKnown RBP13.75□□□□□ -0.21
VRK3-212ENST00000596814 PTGER1P34995 402 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
VRK3-212ENST00000596814 SELPLGQ14242 412 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 LTB4RQ15722 352 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
VRK3-212ENST00000596814 TMEM164Q5U3C3 297 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 ULK2Q8IYT8 1036 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 CLEC4FQ8N1N0 589 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 STT3BQ8TCJ2 826 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 ADAMTS14Q8WXS8 1223 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
VRK3-212ENST00000596814 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 TPT1P8Q9HAU6 139 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 ACSL6Q9UKU0 697 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 PTPRBP23467 1997 aa13.75□□□□□ -0.21
VRK3-212ENST00000596814 MYOCOSA0A1B0GUC4 107 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 OR2W5A6NFC9 320 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 C9orf172C9J069 976 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 CLIC1O00299 241 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 PDE5AO76074 875 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 SLC35E2P0CK97 266 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 NT5EP21589 574 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 CHI3L1P36222 383 aaPredicted RBP13.74□□□□□ -0.21
VRK3-212ENST00000596814 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 PIGGQ5H8A4 983 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 CPZQ66K79 652 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 TMEM107Q6UX40 140 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 PRSS58Q8IYP2 241 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 ST13P4Q8IZP2 240 aaPredicted RBP13.74□□□□□ -0.21
VRK3-212ENST00000596814 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 GALNT6Q8NCL4 622 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 MR1Q95460 341 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 THUMPD3Q9BV44 507 aaKnown RBP13.74□□□□□ -0.21
VRK3-212ENST00000596814 IKZF5Q9H5V7 419 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 NECTIN3Q9NQS3 549 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 PACSIN3Q9UKS6 424 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
VRK3-212ENST00000596814 EVPLLA8MZ36 301 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 C9J4A7 227 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 ALBP02768 609 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 ZGLP1P0C6A0 271 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 MC3RP41968 323 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 RHAGQ02094 409 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 BIKQ13323 160 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 RSPO4Q2I0M5 234 aaPredicted RBP13.73□□□□□ -0.21
VRK3-212ENST00000596814 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 LCN10Q6JVE6 187 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 ANGPTL8Q6UXH0 198 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 SZRD1Q7Z422 152 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 FBXW8Q8N3Y1 598 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 RNF148Q8N7C7 305 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 ADCY4Q8NFM4 1077 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
VRK3-212ENST00000596814 SFXN5Q8TD22 340 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 MOAP1Q96BY2 351 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 PELOQ9BRX2 385 aaKnown RBP13.73□□□□□ -0.21
VRK3-212ENST00000596814 ALOXE3Q9BYJ1 711 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 VN1R1Q9GZP7 353 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 SLC26A1Q9H2B4 701 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 GPN3Q9UHW5 284 aaPredicted RBP13.73□□□□□ -0.21
VRK3-212ENST00000596814 MKL2Q9ULH7 1088 aa13.73□□□□□ -0.21
VRK3-212ENST00000596814 CORO2BQ9UQ03 480 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms