RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 C1orf109Q9NX04 203 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 HEY2Q9UBP5 337 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 GIMAP2Q9UG22 337 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 PSME2Q9UL46 239 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 ERVK-19Q9WJR5 959 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 B3GNT3Q9Y2A9 372 aa10.33□□□□□ -0.76
LIG1-211ENST00000596457 ATP6AP2A0A1C7CYW4 349 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 SYNDIG1LA6NDD5 238 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 GABRR3A8MPY1 467 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 HRKO00198 91 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 WWP2O00308 870 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 FCHO1O14526 889 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 PRKNO60260 465 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 PEX11AO75192 247 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ATP6AP2O75787 350 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ZFAND5O76080 213 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 DDAH2O95865 285 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 SLC35E2P0CK97 266 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 PORP16435 677 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 GRK2P25098 689 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 IGLV3-21P80748 117 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 TLE1Q04724 770 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ZNF763Q0D2J5 394 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 BST1Q10588 318 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 HEPACAMQ14CZ8 416 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 TERF2Q15554 542 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 PDCD2Q16342 344 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 UGT3A2Q3SY77 523 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 H3F3CQ6NXT2 135 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 IGFL2Q6UWQ7 119 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 IGFL3Q6UXB1 125 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 C16orf47Q6ZP98 133 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 Q6ZSR9 355 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ST13P4Q8IZP2 240 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 CISD2Q8N5K1 135 aaKnown RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 APCDD1LQ8NCL9 501 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 C7orf57Q8NEG2 295 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 OR6Y1Q8NGX8 325 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 CLHC1Q8NHS4 586 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 SUN3Q8TAQ9 357 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ZNF721Q8TF20 911 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 GFM2Q969S9 779 aaKnown RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 PNPLA2Q96AD5 504 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 SENP5Q96HI0 755 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 UTP23Q9BRU9 249 aaKnown RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 PELOQ9BRX2 385 aaKnown RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 PNPOQ9NVS9 261 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 COPS7AQ9UBW8 275 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ZNF223Q9UK11 482 aaPredicted RBP10.32□□□□□ -0.76
LIG1-211ENST00000596457 UTS2RQ9UKP6 389 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 CES1P1Q9UKY3 287 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 RAP2CQ9Y3L5 183 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 CCL27Q9Y4X3 112 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 ZNF780BQ9Y6R6 833 aa10.32□□□□□ -0.76
LIG1-211ENST00000596457 UQCRHLA0A096LP55 91 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 OR5H15A6NDH6 313 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 AKAP10O43572 662 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 LRATO95237 230 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 CT62P0C5K7 136 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 KITP10721 976 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 CPMP14384 443 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 DRD2P14416 443 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 CSNK2A2P19784 350 aaPredicted RBP10.31□□□□□ -0.76
LIG1-211ENST00000596457 CD96P40200 585 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 RPL14P50914 215 aaKnown RBP10.31□□□□□ -0.76
LIG1-211ENST00000596457 GPR143P51810 404 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 MLF1P58340 268 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 TUBA3CQ13748 450 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 ZNF169Q14929 603 aaPredicted RBP10.31□□□□□ -0.76
LIG1-211ENST00000596457 RFTN2Q52LD8 501 aaPredicted RBP10.31□□□□□ -0.76
LIG1-211ENST00000596457 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
LIG1-211ENST00000596457 TUBA3EQ6PEY2 450 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 HSDL2Q6YN16 418 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 RNF111Q6ZNA4 994 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 Q6ZS92 163 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 CCDC116Q8IYX3 515 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 ADCY4Q8NFM4 1077 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 HAS2Q92819 552 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 TUBGCP3Q96CW5 907 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 EGLN2Q96KS0 407 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 ART5Q96L15 291 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 C3orf30Q96M34 536 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 TSSK3Q96PN8 268 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 C1orf50Q9BV19 199 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 MANSC1Q9H8J5 431 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 VIPAS39Q9H9C1 493 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 GIMAP4Q9NUV9 329 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 BAIAP2L1Q9UHR4 511 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 ENTPD4Q9Y227 616 aa10.31□□□□□ -0.76
LIG1-211ENST00000596457 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 LSM1O15116 133 aaKnown RBP10.3□□□□□ -0.76
LIG1-211ENST00000596457 ITGA10O75578 1167 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 SASH3O75995 380 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 OR2J2O76002 312 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 TACR1P25103 407 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 SSTR4P31391 388 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 SSR4P51571 173 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 RNF4P78317 190 aa10.3□□□□□ -0.76
LIG1-211ENST00000596457 SRSF11Q05519 484 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms