RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 HPNP05981 417 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 INHBBP09529 407 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 CD1DP15813 335 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 ALOX15P16050 662 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 CD53P19397 219 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 GDF1P27539 372 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 SSR2P43308 183 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 HNRNPH2P55795 449 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 SLC37A1P57057 533 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 DCAF7P61962 342 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 POU4F1Q01851 419 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 TNFRSF17Q02223 184 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 PCDH1Q08174 1060 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 BIKQ13323 160 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 HIST2H2ACQ16777 129 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 AP5B1Q2VPB7 878 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 NHSL2Q5HYW2 709 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 TBCELQ5QJ74 424 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 KHDRBS2Q5VWX1 349 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 C18orf63Q68DL7 685 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 VASNQ6EMK4 673 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 HIST2H2AA3Q6FI13 130 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 TMEM64Q6YI46 380 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 LRRC70Q7Z2Q7 622 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 KIF18BQ86Y91 864 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 PM20D2Q8IYS1 436 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 ST13P4Q8IZP2 240 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 OR7G3Q8NG95 312 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 MBD3L2Q8NHZ7 208 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 LINC01560Q8TB33 94 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 HSPBAP1Q96EW2 488 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 RBM18Q96H35 190 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 GAL3ST4Q96RP7 486 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 PHACTR1Q9C0D0 580 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 EPB41L4BQ9H329 900 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 OR51B5Q9H339 312 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 SMYD2Q9NRG4 433 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.13□□□□□ -0.95
LIG1-209ENST00000596104 MS4A12Q9NXJ0 267 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 JKAMPQ9P055 326 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 MTO1Q9Y2Z2 717 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 IQANK1A0A1B0GTG1 560 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 OR6C76A6NM76 312 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CLCA1A8K7I4 914 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 E7ESA3 106 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CES2O00748 559 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 PLPP1O14494 284 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 PHGDHO43175 533 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 CCNT2O60583 730 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 ACSL3O95573 720 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 GPR75O95800 540 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 IL18BPO95998 194 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CCDC166P0CW27 439 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CTSSP25774 331 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ADSLP30566 484 aaPredicted RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 SERPINB1P30740 379 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 AGFG1P52594 562 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 SLC12A2P55011 1212 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ARL4CP56559 192 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ATP6V0D1P61421 351 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CBLBQ13191 982 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ZNF267Q14586 743 aaPredicted RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 RPS6KA2Q15349 733 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 DCST1Q5T197 706 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 TMEM198Q66K66 360 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 BICRALQ6AI39 1079 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 OR4C11Q6IEV9 310 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 MRM1Q6IN84 353 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 MED27Q6P2C8 311 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 RNF111Q6ZNA4 994 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 SLC29A4Q7RTT9 530 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 GPR180Q86V85 440 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 SLC35F6Q8N357 371 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ZCCHC7Q8N3Z6 543 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 RNF175Q8N4F7 328 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 FBXO36Q8NEA4 188 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 SPPL2AQ8TCT8 520 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 DIO2Q92813 273 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 TANKQ92844 425 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 UBE2E3Q969T4 207 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CMTM7Q96FZ5 175 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 WDYHV1Q96HA8 205 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 RILPQ96NA2 401 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 GNRHR2Q96P88 292 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 KRT12Q99456 494 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 PELOQ9BRX2 385 aaKnown RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 ZNF717Q9BY31 904 aaPredicted RBP9.12□□□□□ -0.95
LIG1-209ENST00000596104 UGT2B28Q9BY64 529 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 ANGPTL4Q9BY76 406 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CD244Q9BZW8 370 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 NEUROD4Q9HD90 331 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 NSMCE4AQ9NXX6 385 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 CD274Q9NZQ7 290 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 PHF11Q9UIL8 331 aa9.12□□□□□ -0.95
LIG1-209ENST00000596104 SNX12Q9UMY4 172 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms