RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PIK3CBP42338 1070 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 SSR2P43308 183 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 HK2P52789 917 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 IGLV3-21P80748 117 aaPredicted RBP16.6■□□□□ 0.25
HOMER3-208ENST00000595756 AP5B1Q2VPB7 878 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 GGTA1PQ4G0N0 100 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 UNC50Q53HI1 259 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 CFAP157Q5JU67 520 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 KHDRBS2Q5VWX1 349 aaKnown RBP16.6■□□□□ 0.25
HOMER3-208ENST00000595756 LIPMQ5VYY2 423 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 ARHGAP11AQ6P4F7 1023 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 C16orf47Q6ZP98 133 aaPredicted RBP16.6■□□□□ 0.25
HOMER3-208ENST00000595756 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 FAM111AQ96PZ2 611 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 TMEM237Q96Q45 408 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 OR8D2Q9GZM6 311 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 TMBIM4Q9HC24 238 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 ZBTB26Q9HCK0 441 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 PRM3Q9NNZ6 103 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 DEPPQ9NTK1 212 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 COPS7AQ9UBW8 275 aa16.6■□□□□ 0.25
HOMER3-208ENST00000595756 C19orf84I3L1E1 186 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 CDC40O60508 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
HOMER3-208ENST00000595756 ZWINTO95229 277 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 TPOP07202 933 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 COX7A2P14406 83 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 ARFIP1P53367 373 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 PKNOX1P55347 436 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 RNF4P78317 190 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 LCP2Q13094 533 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 RGS9BPQ6ZS82 235 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 CCNYL1Q8N7R7 359 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 GOLGA6L1Q8N7Z2 621 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 GOLM1Q8NBJ4 401 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 OR2M7Q8NG81 312 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 OR52B6Q8NGF0 335 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 NSUN5Q96P11 429 aaKnown RBP16.59■□□□□ 0.25
HOMER3-208ENST00000595756 ZNF382Q96SR6 550 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 ZDHHC11Q9H8X9 412 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 LIN28AQ9H9Z2 209 aaKnown RBP16.59■□□□□ 0.25
HOMER3-208ENST00000595756 MS4A12Q9NXJ0 267 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 PSD3Q9NYI0 1048 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 PPT2Q9UMR5 302 aa16.59■□□□□ 0.25
HOMER3-208ENST00000595756 PHF3Q92576 2039 aaKnown RBP16.58■□□□□ 0.25
HOMER3-208ENST00000595756 ZNF407Q9C0G0 2248 aa16.58■□□□□ 0.25
HOMER3-208ENST00000595756 WWP2O00308 870 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TGFB1P01137 390 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 SNRPB2P08579 225 aaKnown RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 CPN2P22792 545 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ELAVL4P26378 380 aaKnown RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 STT3AP46977 705 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 NAGLUP54802 743 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 CDH13P55290 713 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TRAF3Q13114 568 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 CPSF6Q16630 551 aaKnown RBP eCLIP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 DEPDC1Q5TB30 811 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 AGBL2Q5U5Z8 902 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 IL20RBQ6UXL0 311 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 C3P1Q6ZMU1 363 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 RTL4Q6ZR62 310 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 GK5Q6ZS86 529 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ZCCHC7Q8N3Z6 543 aaKnown RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ZNF321PQ8N8H1 164 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ACBD4Q8NC06 268 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 OR52N2Q8NGI0 321 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 OR5L2Q8NGL0 311 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TRPC4APQ8TEL6 797 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ANKRD9Q96BM1 317 aaPredicted RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TRMOQ9BU70 441 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TP63Q9H3D4 680 aaPredicted RBP16.58■□□□□ 0.24
HOMER3-208ENST00000595756 ACBD3Q9H3P7 528 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 KCNK9Q9NPC2 374 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 DMRT3Q9NQL9 472 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 COQ3Q9NZJ6 369 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 TRPS1Q9UHF7 1281 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 PHF11Q9UIL8 331 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 SNX6Q9UNH7 406 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 RNF11Q9Y3C5 154 aa16.58■□□□□ 0.24
HOMER3-208ENST00000595756 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 MYOCOSA0A1B0GUC4 107 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 FGF17O60258 216 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 ENO1P06733 434 aaKnown RBP16.57■□□□□ 0.24
HOMER3-208ENST00000595756 CREB1P16220 341 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 TNNI3P19429 210 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 RAP1GDS1P52306 607 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 SLC18A1P54219 525 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 PLIN5Q00G26 463 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 TNFRSF17Q02223 184 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 IFT88Q13099 833 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 BIKQ13323 160 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 PCLAFQ15004 111 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 NDUFAF5Q5TEU4 345 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 OR4C11Q6IEV9 310 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 PAOXQ6QHF9 649 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 OPN5Q6U736 354 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 GPRIN3Q6ZVF9 776 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 SLC22A16Q86VW1 577 aa16.57■□□□□ 0.24
HOMER3-208ENST00000595756 C10orf107Q8IVU9 208 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms