RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ROS1P08922 2347 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 USF3Q68DE3 2245 aa12.58□□□□□ -0.39
SHKBP1-208ENST00000595726 FREM3P0C091 2139 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 A0A087X1B8 175 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 ACSL3O95573 720 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 CTAGE8P0CG41 777 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 TMIGD3P0DMS9 266 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 STMN1P16949 149 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 FPR1P21462 350 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 CPA2P48052 419 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 HSD17B7P56937 341 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 DMTNQ08495 405 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 NAB1Q13506 487 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 PIGGQ5H8A4 983 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 GRTP1Q5TC63 336 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 FRA10AC1Q70Z53 315 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 CTAGE4Q8IX94 777 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 MNS1Q8NEH6 495 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 NEIL2Q969S2 332 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 TSPAN17Q96FV3 270 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 TSNARE1Q96NA8 513 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 SECISBP2Q96T21 854 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 DERL2Q9GZP9 239 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 CTNNAL1Q9UBT7 734 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 ADGRE2Q9UHX3 823 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 MEGF8Q7Z7M0 2845 aa12.58□□□□□ -0.4
SHKBP1-208ENST00000595726 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 HAX1O00165 279 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 ERN1O75460 977 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 TRAPPC6AO75865 159 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 CCDC166P0CW27 439 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 CD1DP15813 335 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 TNNI3P19429 210 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 GDF1P27539 372 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 SOX18P35713 384 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 AHRP35869 848 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 SLCO1A2P46721 670 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 RAB10P61026 200 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 RBBP5Q15291 538 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 DCST1Q5T197 706 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 UBAP2Q5T6F2 1119 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 HIPK1Q86Z02 1210 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 MORN4Q8NDC4 146 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 SLC2A12Q8TD20 617 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 PAQR8Q8TEZ7 354 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 SLC44A1Q8WWI5 657 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 SLC5A11Q8WWX8 675 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 EGFL8Q99944 293 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 ALOXE3Q9BYJ1 711 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 PRDM14Q9GZV8 571 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 NDRG3Q9UGV2 375 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 TESMINQ9Y4I5 508 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 DSCAMO60469 2012 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 NINQ8N4C6 2090 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 ABCA1O95477 2261 aa12.57□□□□□ -0.4
SHKBP1-208ENST00000595726 URADA6NGE7 173 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 C17orf105B2RV13 164 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 SNPHO15079 494 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 ETHE1O95571 254 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 IL18BPO95998 194 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 ECHS1P30084 290 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 GMPRP36959 345 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 SLC6A12P48065 614 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 HNMTP50135 292 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 ID2Q02363 134 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 CSHL1Q14406 222 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 TGFBIQ15582 683 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 VASNQ6EMK4 673 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 CMC1Q7Z7K0 106 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 THOC6Q86W42 341 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 RELL1Q8IUW5 271 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 KLHDC8AQ8IYD2 350 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 TBC1D19Q8N5T2 526 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 TRPV3Q8NET8 790 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 OR10G3Q8NGC4 313 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 OR5L2Q8NGL0 311 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
SHKBP1-208ENST00000595726 DAZLQ92904 295 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms