RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 ACOXLQ9NUZ1 547 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 ZSCAN32Q9NX65 697 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 PAQR5Q9NXK6 330 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 SH2B3Q9UQQ2 575 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 SF3B6Q9Y3B4 125 aaKnown RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 CARNS1A5YM72 827 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 A6NL46 340 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SOX14O95416 240 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 GBAP04062 536 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 TSPAN19P0C672 248 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 NR2F6P10588 404 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 PRKCAP17252 672 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SDC2P34741 201 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 FEN1P39748 380 aaKnown RBP12.56□□□□□ -0.4
VRK3-209ENST00000594948 RACK1P63244 317 aaKnown RBP12.56□□□□□ -0.4
VRK3-209ENST00000594948 CDK5Q00535 292 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 RAB40BQ12829 278 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 LCTLQ6UWM7 567 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 ZNF730Q6ZMV8 503 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 GAREM2Q75VX8 874 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 LAPTM4BQ86VI4 370 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 PLCZ1Q86YW0 608 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 PLA2G15Q8NCC3 412 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 ZNF689Q96CS4 500 aaPredicted RBP12.56□□□□□ -0.4
VRK3-209ENST00000594948 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 COQ7Q99807 217 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SOSTQ9BQB4 213 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 MMP28Q9H239 520 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 SEMA3GQ9NS98 782 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 DKK3Q9UBP4 350 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 FAM8A1Q9UBU6 413 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 GSTK1Q9Y2Q3 226 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 EXOSC1Q9Y3B2 195 aaKnown RBP12.56□□□□□ -0.4
VRK3-209ENST00000594948 UTRNP46939 3433 aa12.56□□□□□ -0.4
VRK3-209ENST00000594948 WWP2O00308 870 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 SLC30A4O14863 429 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PLD2O14939 933 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PDPK1O15530 556 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PI15O43692 258 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 SEMA7AO75326 666 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 CXCL10P02778 98 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 MYL12AP19105 171 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 GSTM3P21266 225 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PDHA2P29803 388 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 GAS1P54826 345 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TAP2Q03519 686 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 UBE3AQ05086 875 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 C19orf57Q0VDD7 668 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TAB1Q15750 504 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 RPS26P11Q5JNZ5 115 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 ENTPD8Q5MY95 495 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 MZT2BQ6NZ67 158 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 MRGPREQ86SM8 312 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TMC8Q8IU68 726 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 GPR65Q8IYL9 337 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 KRT78Q8N1N4 520 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 DUSP18Q8NEJ0 188 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ENKURQ8TC29 256 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 LRIG1Q96JA1 1093 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ZNF582Q96NG8 517 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 PHF11Q9UIL8 331 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PCDHGB7Q9Y5F8 929 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 A8MV72 311 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 SAP18O00422 153 aaKnown RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 TFECO14948 347 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 PLA2G10O15496 165 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PRKYO43930 277 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 NME6O75414 186 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 IGFBP1P08833 259 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 ACP2P11117 423 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 GPC1P35052 558 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 OPRD1P41143 372 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ETV5P41161 510 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 KIR2DL3P43628 341 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ETV1P50549 477 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 SMSP52788 366 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 PCBP4P57723 403 aaKnown RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 DMPKQ09013 629 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■□ 23
VRK3-209ENST00000594948 MLC1Q15049 377 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 C1orf94Q6P1W5 598 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TMIGD1Q6UXZ0 262 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TMEM163Q8TC26 289 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 TTC9Q92623 222 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms