RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 AHSPQ9NZD4 102 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 KCMF1Q9P0J7 381 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 MYOTQ9UBF9 498 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 TRPS1Q9UHF7 1281 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 RNF6Q9Y252 685 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 CELSR1Q9NYQ6 3014 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CCDC151A5D8V7 595 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 A8MVJ9 347 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 G3V2L1 256 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 H3BQF6 201 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 PRKNO60260 465 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 SH3BGRLO75368 114 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 OR2J2O76002 312 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 TOXO94900 526 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CPA3P15088 417 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 HIST1H1TP22492 207 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ATP5A1P25705 553 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CERS1P27544 350 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 MSX1P28360 303 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 HNRNPFP52597 415 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 LIM2P55344 173 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 PKNOX1P55347 436 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 DNAJB13P59910 316 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ASPHQ12797 758 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 SLC13A2Q13183 592 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ELAVL1Q15717 326 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 EMC4Q5J8M3 183 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CFAP157Q5JU67 520 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 UBE3DQ7Z6J8 389 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 TMEM132CQ8N3T6 1108 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CCNYL1Q8N7R7 359 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 APOPT1Q96IL0 206 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 TMEM237Q96Q45 408 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 SMC6Q96SB8 1091 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ZDHHC11Q9H8X9 412 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 HPF1Q9NWY4 346 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 MS4A12Q9NXJ0 267 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 TNFRSF10DQ9UBN6 386 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 DAPP1Q9UN19 280 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 ERVK-11Q9UQG0 969 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 CACNA1CQ13936 2221 aa16.26■□□□□ 0.19
SHKBP1-203ENST00000594298 PINLYPA6NC86 204 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 ACOT7O00154 380 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 CYR61O00622 381 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 PDE9AO76083 593 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 SCELO95171 688 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 KRT6AP02538 564 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 KRT6BP04259 564 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 KRT6CP48668 564 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 NEK2P51955 445 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 LCP2Q13094 533 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 ACAD11Q709F0 780 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 DMRTC2Q8IXT2 367 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 RPRMLQ8N4K4 120 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 BANPQ8N9N5 519 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 FAM47BQ8NA70 645 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 OR2M7Q8NG81 312 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 SELENOMQ8WWX9 145 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 ASB15Q8WXK1 588 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 KCNJ16Q9NPI9 418 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 PLLPQ9Y342 182 aa16.25■□□□□ 0.19
SHKBP1-203ENST00000594298 TACC2O95359 2948 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 HIVEP1P15822 2718 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 NKX2-6A6NCS4 301 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 OR14I1A6ND48 311 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 RTCAO00442 366 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 RGS16O15492 202 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 CTNSO60931 367 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 GLSO94925 669 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 OR6B1O95007 311 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 OR4F21O95013 312 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 SEMA3DO95025 777 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 TSPAN8P19075 237 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 HMOX2P30519 316 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 TLX1P31314 330 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 NR0B1P51843 470 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 PPIAP62937 165 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 SLAMF1Q13291 335 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 NDUFAF5Q5TEU4 345 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 HSDL2Q6YN16 418 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 ZNF793Q6ZN11 406 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 C16orf47Q6ZP98 133 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 RPS27LQ71UM5 84 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 PAGE2Q7Z2X7 111 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 HOMEZQ8IX15 550 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 ZCCHC7Q8N3Z6 543 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 MORN4Q8NDC4 146 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 OR8K3Q8NH51 312 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 METTL6Q8TCB7 284 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 SREK1Q8WXA9 508 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 DAZLQ92904 295 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 RASL10BQ96S79 203 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 UCK2Q9BZX2 261 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 DEFB127Q9H1M4 99 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms