RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TNFRSF12AQ9NP84 129 aa17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 MID1IP1Q9NPA3 183 aa17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 LGALS13Q9UHV8 139 aa17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 ERVK-19Q9WJR5 959 aa17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 KLF13Q9Y2Y9 288 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 PCDHA9Q9Y5H5 950 aa17.13■□□□□ 0.33
SHKBP1-202ENST00000593764 MYO7BQ6PIF6 2116 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 NBPF19A0A087WUL8 3843 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 SERTM1A2A2V5 107 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 CYSRT1A8MQ03 144 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 A8MVJ9 347 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 LRRTM2O43300 516 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 DYRK3O43781 588 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 PIK3R1P27986 724 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 XKP51811 444 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 SLC37A1P57057 533 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 NAA20P61599 178 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 RAE1P78406 368 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 HMGCS1Q01581 520 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ALDH6A1Q02252 535 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 MPEG1Q2M385 716 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ERCC6LQ2NKX8 1250 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 PIGGQ5H8A4 983 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 SCIMPQ6UWF3 145 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 TRABD2AQ86V40 505 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 GPALPP1Q8IXQ4 340 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 GBP7Q8N8V2 638 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 BANPQ8N9N5 519 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 FAM98AQ8NCA5 519 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 GPR137Q96N19 417 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 CNPPD1Q9BV87 410 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ROPN1BQ9BZX4 212 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ROPN1Q9HAT0 212 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 DEPPQ9NTK1 212 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 HPF1Q9NWY4 346 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 MKS1Q9NXB0 559 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 ERVK-11Q9UQG0 969 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 PLLPQ9Y342 182 aa17.12■□□□□ 0.33
SHKBP1-202ENST00000593764 C1orf226A1L170 272 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 NPIPA5E9PKD4 350 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 PEX1O43933 1283 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 GUCY1B2O75343 617 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 CT62P0C5K7 136 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 MEOX1P50221 254 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 TRA2BP62995 288 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 ASPHQ12797 758 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 KRTCAP3Q53RY4 240 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 SLC48A1Q6P1K1 146 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 PSD4Q8NDX1 1056 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 APIPQ96GX9 242 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 TIMMDC1Q9NPL8 285 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 NPIPA1Q9UND3 350 aa17.11■□□□□ 0.33
SHKBP1-202ENST00000593764 KLRC4-KLRK1H3BQV0 150 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 ASNA1O43681 348 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 NADKO95544 446 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 GP1BBP13224 206 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 CPMP14384 443 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 PORP16435 677 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 SSTR4P31391 388 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 GPR85P60893 370 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 IFFO1Q0D2I5 559 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 FUT7Q11130 342 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 PCLAFQ15004 111 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 C1QL3Q5VWW1 255 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 LIPMQ5VYY2 423 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 LYPD8Q6UX82 237 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 MREGQ8N565 214 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 CCDC63Q8NA47 563 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 ZFP62Q8NB50 900 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 POGLUT1Q8NBL1 392 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 C16orf52Q8NHV5 167 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 RELTQ969Z4 430 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 HEY2Q9UBP5 337 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 MCM8Q9UJA3 840 aa17.1■□□□□ 0.33
SHKBP1-202ENST00000593764 EML6Q6ZMW3 1958 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 GTF3C1Q12789 2109 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF24P17028 368 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 S1PR1P21453 382 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SERPINB3P29508 390 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SOX18P35713 384 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 RFC3P40938 356 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 MGAT2Q10469 447 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF791Q3KP31 576 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 GALNT18Q6P9A2 607 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 OPN5Q6U736 354 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 CHERPQ8IWX8 916 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SRRM1Q8IYB3 904 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF615Q8N8J6 731 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 APOPT1Q96IL0 206 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF681Q96N22 645 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 TMEM109Q9BVC6 243 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 GATA5Q9BWX5 397 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms