RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TRAF6Q9Y4K3 522 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 DNAJC15Q9Y5T4 150 aa10.71□□□□□ -0.69
VMP1-211ENST00000591315 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 NUP214P35658 2090 aaPredicted RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 GNG14A0A1W2PPG7 69 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 TMEM120BA0PK00 339 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 BLACEA4D250 179 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 PIP5K1BO14986 540 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 OR10H2O60403 315 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 ERAL1O75616 437 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 NEURL1O76050 574 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 ZFAND5O76080 213 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 JUNP05412 331 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 ANXA4P09525 319 aaPredicted RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 SLC35E2P0CK97 266 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 CPMP14384 443 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 PIK3R1P27986 724 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 SSTR4P31391 388 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 HK2P52789 917 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 NAA20P61599 178 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 AP2B1P63010 937 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 PLIN5Q00G26 463 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 OC90Q02509 493 aaPredicted RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 MGAT2Q10469 447 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 ASPHQ12797 758 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 KIAA0040Q15053 153 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 OR1C1Q15619 314 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 LTB4RQ15722 352 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 SH2D4BQ5SQS7 431 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 SLC48A1Q6P1K1 146 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 GALNT18Q6P9A2 607 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 C9orf40Q8IXQ3 194 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 ST13P4Q8IZP2 240 aaPredicted RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 ADCY4Q8NFM4 1077 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 OR4K14Q8NGD5 310 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 GRHL3Q8TE85 626 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 NUDT8Q8WV74 236 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 TWIST2Q8WVJ9 160 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 RIT1Q92963 219 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 EXOSC8Q96B26 276 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 RBM18Q96H35 190 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 EGLN2Q96KS0 407 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 PAIP2Q9BPZ3 127 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 UTP23Q9BRU9 249 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 TRMOQ9BU70 441 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 RNF32Q9H0A6 362 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 ANKRA2Q9H9E1 313 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 CXorf21Q9HAI6 301 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 TEKT2Q9UIF3 430 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 COPG1Q9Y678 874 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 NINQ8N4C6 2090 aa10.7□□□□□ -0.7
VMP1-211ENST00000591315 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
VMP1-211ENST00000591315 SPTAN1Q13813 2472 aaKnown RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 DIDO1Q9BTC0 2240 aaKnown RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 TRAV17A0A0B4J275 112 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ATP6AP2A0A1C7CYW4 349 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 C1orf226A1L170 272 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 TCP11X1B4DZS4 312 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 PRAMEF2O60811 474 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 SEC22BO75396 215 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 SKAP2O75563 359 aaPredicted RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 ITGA10O75578 1167 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ATP6AP2O75787 350 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 OR2J2O76002 312 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 WISP1O95388 367 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 FGF4P08620 206 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 H2AFXP16104 143 aaPredicted RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 NT5EP21589 574 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 GNLYP22749 145 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 RNF4P78317 190 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 C2orf80Q0P641 193 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 DUSP8Q13202 625 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 MRPL49Q13405 166 aaKnown RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 RFTN2Q52LD8 501 aaPredicted RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 SPIN4Q56A73 249 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ZNF766Q5HY98 468 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ANKRD26P1Q6NSI1 321 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 NOXRED1Q6NXP6 359 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 HSDL2Q6YN16 418 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 DDIASQ8IXT1 998 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 CLYBLQ8N0X4 340 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ARMC10Q8N2F6 343 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 CLHC1Q8NHS4 586 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.69□□□□□ -0.7
VMP1-211ENST00000591315 GFM2Q969S9 779 aaKnown RBP10.69□□□□□ -0.7
VMP1-211ENST00000591315 FBXL20Q96IG2 436 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ZNF681Q96N22 645 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 SORT1Q99523 831 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 LRTM1Q9HBL6 345 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 LRFN1Q9P244 771 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ACTL7BQ9Y614 415 aa10.69□□□□□ -0.7
VMP1-211ENST00000591315 ZNF407Q9C0G0 2248 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 A0A0G2JMM0 328 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 A0A1W2PPB8 328 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 A0A1W2PRS3 328 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 KIR3DP1A8MWS1 328 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms