RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 NFATC3Q12968 1075 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 BNIP1Q12981 228 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 SFRP1Q8N474 314 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 NPAS2Q99743 824 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 DPH1Q9BZG8 443 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 CDCP1Q9H5V8 836 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 ABCB10Q9NRK6 738 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 TAS2R7Q9NYW3 318 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 ERGIC3Q9Y282 383 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 FKBP7Q9Y680 259 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 A0A1B0GVI7 797 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 OR6C65A6NJZ3 312 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 PIP5K1BO14986 540 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 CLOCKO15516 846 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 ZBTB49Q6ZSB9 765 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 C10orf107Q8IVU9 208 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 DTX3Q8N9I9 347 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 MAGEE2Q8TD90 523 aaPredicted RBP10.85□□□□□ -0.67
SEH1L-208ENST00000590843 ST7LQ8TDW4 575 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 COQ8BQ96D53 544 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 OXNAD1Q96HP4 312 aaPredicted RBP10.85□□□□□ -0.67
SEH1L-208ENST00000590843 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 FBXL3Q9UKT7 428 aa10.85□□□□□ -0.67
SEH1L-208ENST00000590843 ATXN7O15265 892 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 TMEM63AO94886 807 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ZNF883P0CG24 379 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 LEPRP48357 1165 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ST13P50502 369 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 TARDBPQ13148 414 aaKnown RBP eCLIP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FAM182AQ5T1J6 154 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 RPL13AP3Q6NVV1 102 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ZNF75CPQ92670 426 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 STRA6Q9BX79 667 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 RASSF4Q9H2L5 321 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 TMBIM4Q9HC24 238 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 YARS2Q9Y2Z4 477 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 LCA5LO95447 670 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 BPGMP07738 259 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 UBTFL6P0CB48 400 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 GABRA1P14867 456 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 IDH2P48735 452 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 DEFA1P59665 94 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 DEFA3P59666 94 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 PPIAP62937 165 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 PQLC3Q8N755 202 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ABHD11Q8NFV4 315 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 OMA1Q96E52 524 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 SMURF1Q9HCE7 757 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 STOX2Q9P2F5 926 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FBXO9Q9UK97 447 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ITGB1BP2Q9UKP3 347 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 IKZF3Q9UKT9 509 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 EIF1BO60739 113 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 HOXC4P09017 264 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 XRCC1P18887 633 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 SGSHP51688 502 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 SNAPC1Q16533 368 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FRRS1Q6ZNA5 592 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ZNF283Q8N7M2 679 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 GIN1Q9NXP7 522 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 LRFN1Q9P244 771 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 PRSS51A0A1B0GVH4 220 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 A6NIZ1 184 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FAM25AB3EWG3 89 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FAM25CB3EWG5 89 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FAM25GB3EWG6 89 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 FKBP6O75344 327 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 SLC43A1O75387 559 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 PNMTP11086 282 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 DCTP40126 519 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 RAP1BP61224 184 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 RAP1AP62834 184 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 SIX1Q15475 284 aaPredicted RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 DEFB107AQ8IZN7 70 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 GPR26Q8NDV2 337 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 RHEBL1Q8TAI7 183 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 F2RL3Q96RI0 385 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 MKRN2Q9H000 416 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 ZNF160Q9HCG1 818 aa10.84□□□□□ -0.67
SEH1L-208ENST00000590843 R3HDM2Q9Y2K5 976 aaKnown RBP10.84□□□□□ -0.67
SEH1L-208ENST00000590843 LOC105369274A0A096LPK9 316 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 A0A1B0GUH1 482 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 FABP3P05413 133 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 ZNF35P13682 527 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 HIST1H1TP22492 207 aaPredicted RBP10.83□□□□□ -0.68
SEH1L-208ENST00000590843 THBS2P35442 1172 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 SLC3A1Q07837 685 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 INAQ16352 499 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 PYCR3Q53H96 274 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 SCUBE1Q8IWY4 988 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 GPALPP1Q8IXQ4 340 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.83□□□□□ -0.68
SEH1L-208ENST00000590843 OR4N4Q8N0Y3 316 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 MMP21Q8N119 569 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 PNPLA1Q8N8W4 532 aa10.83□□□□□ -0.68
SEH1L-208ENST00000590843 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms