RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 NR2F6P10588 404 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 SERPINB3P29508 390 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 GUCY2DQ02846 1103 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 CUL3Q13618 768 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 GTF2H2Q13888 395 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 PCBP2Q15366 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 SPRED3Q2MJR0 410 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 GTF2H2CQ6P1K8 395 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 DMRTC2Q8IXT2 367 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 CLYBLQ8N0X4 340 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 FAM13CQ8NE31 585 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 DOK4Q8TEW6 326 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 PAQR8Q8TEZ7 354 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF559Q9BR84 538 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC24A3Q9HC58 644 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 SH2D2AQ9NP31 389 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 ZFP64Q9NPA5 681 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 SEMA4BQ9NPR2 832 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 ALKBH4Q9NXW9 302 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 CPSF2Q9P2I0 782 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 ASB4Q9Y574 426 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 C2CD3Q4AC94 2353 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 SETD2Q9BYW2 2564 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 NCKAP5O14513 1909 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 A0A0A6YYD5 115 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 LRRC14BA6NHZ5 514 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 GLOD5A6NK44 160 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 OR6C76A6NM76 312 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 FAM47E-STBD1D6RA91 191 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 EEDO75530 441 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 HOXD4P09016 255 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 FREM3P0C091 2139 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 TYK2P29597 1187 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 PHBP35232 272 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 ARL1P40616 181 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 ZFP36L2P47974 494 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 PRAMEF20Q5VT98 475 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 GOLGA7Q7Z5G4 137 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 NUDT13Q86X67 352 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 TAGAPQ8N103 731 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF717Q9BY31 904 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 WWTR1Q9GZV5 400 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 DDX31Q9H8H2 851 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 PSD3Q9NYI0 1048 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 ARHGAP21Q5T5U3 1957 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 MED13LQ71F56 2210 aa16.53■□□□□ 0.24
PRKCSH-211ENST00000590098 MAP1AP78559 2803 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 A0A1W2PR48 441 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 WASHC1A8K0Z3 465 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 FOXE1O00358 373 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 TMPRSS11DO60235 418 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 KLK8O60259 260 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 CLDN9O95484 217 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 FBXO45P0C2W1 286 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC35E2P0CK97 266 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 GABRA1P14867 456 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 GALNSP34059 522 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 BSGP35613 385 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 SERPINB8P50452 374 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 NEK2P51955 445 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC37A1P57057 533 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 ETF1P62495 437 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 MYBPHQ13203 477 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 C1orf185Q5T7R7 199 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 CES4AQ5XG92 561 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 RTL6Q6ICC9 239 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 LYPD8Q6UX82 237 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 SYT10Q6XYQ8 523 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 OR10G3Q8NGC4 313 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 ATP6V1E2Q96A05 226 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 JSRP1Q96MG2 331 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 VPS11Q9H270 941 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF703Q9H7S9 590 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 B4GALT7Q9UBV7 327 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 KCNN3Q9UGI6 736 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 RNF11Q9Y3C5 154 aa16.52■□□□□ 0.24
PRKCSH-211ENST00000590098 A0A0G2JNJ9 132 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 ESYT3A0FGR9 886 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 HMX2A2RU54 273 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 CAPN14A8MX76 684 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 SIX3O95343 332 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 SLC7A5Q01650 507 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 EBPQ15125 230 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 OR52E8Q6IFG1 317 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 ADGRD1Q6QNK2 874 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 LRRC25Q8N386 305 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 LIX1Q8N485 282 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 DOHHQ9BU89 302 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 NOL11Q9H8H0 719 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 QPCTLQ9NXS2 382 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 SPRR3Q9UBC9 169 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms