RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LATO43561 262 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 SH3BP5O60239 455 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 SERPIND1P05546 499 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 CHRM5P08912 532 aaPredicted RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 RHCEP18577 417 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PCSK6P29122 969 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PEBP1P30086 187 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 PPP2R1BP30154 601 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 MAT2AP31153 395 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 AKT2P31751 481 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 RPS15AP62244 130 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 YPEL5P62699 121 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 IL1RL1Q01638 556 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 NPRL3Q12980 569 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 HSPB3Q12988 150 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 GNA13Q14344 377 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TOR1AIP1Q5JTV8 583 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 ANKRD34AQ69YU3 496 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 XAF1Q6GPH4 301 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 MRM1Q6IN84 353 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 KIAA1324Q6UXG2 1013 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 B3GNT8Q7Z7M8 397 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 FAM124AQ86V42 546 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 AMIGO1Q86WK6 493 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 LGI4Q8N135 537 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PARP8Q8N3A8 854 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 HORMAD2Q8N7B1 307 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 BBS10Q8TAM1 723 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 OR1E3Q8WZA6 343 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 GAL3ST3Q96A11 431 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 MS4A6EQ96DS6 147 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TMEM19Q96HH6 336 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 COG8Q96MW5 612 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 ZNF607Q96SK3 696 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 C17orf62Q9BQA9 187 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 DPH7Q9BTV6 452 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 EDEM2Q9BV94 578 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TPSD1Q9BZJ3 242 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 ROGDIQ9GZN7 287 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 SLC6A17Q9H1V8 727 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 SLC35C2Q9NQQ7 365 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PRDM8Q9NQV8 689 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TEX10Q9NXF1 929 aaPredicted RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 ENTPD4Q9Y227 616 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 PLEKHM1Q9Y4G2 1056 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TPRP12270 2363 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 CROCCQ5TZA2 2017 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 FAM221BA6H8Z2 402 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 ERI3O43414 337 aaKnown RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 LCMT2O60294 686 aaKnown RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 CCNB2O95067 398 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 OXSR1O95747 527 aaPredicted RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 BCHEP06276 602 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 HTR1AP08908 422 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CYP4B1P13584 511 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CD247P20963 164 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 AGXTP21549 392 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 HIST1H1TP22492 207 aaPredicted RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 ATP5A1P25705 553 aaKnown RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 GPC1P35052 558 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 GGT2P36268 569 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 LIMS1P48059 325 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CCT3P49368 545 aaKnown RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 HMGA2P52926 109 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PLA2G16P53816 162 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CDH12P55289 794 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 RGS1Q08116 209 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 KIR2DS3Q14952 304 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 LAPTM4AQ15012 233 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 MICAQ29983 383 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 EXOC3L2Q2M3D2 409 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 NDUFAF5Q5TEU4 345 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PRAMEF8Q5VWM4 474 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PRAMEF7Q5VXH5 474 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 GTF2IRD2BQ6EKJ0 949 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 LAIR2Q6ISS4 152 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 ENPP7Q6UWV6 458 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 ZNF793Q6ZN11 406 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 TSEN54Q7Z6J9 526 aaKnown RBP9.41□□□□□ -0.9
VPS25-202ENST00000589219 GTF2IRD2Q86UP8 949 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 KRT73Q86Y46 540 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 BPIFB6Q8NFQ5 453 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CNIH3Q8TBE1 160 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 NT5CQ8TCD5 201 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 ZFPM2Q8WW38 1151 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 LCN9Q8WX39 176 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PROX1Q92786 737 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms