RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PLA2G2AP14555 144 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 DIO3P55073 304 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 ID2Q02363 134 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 C6orf163Q5TEZ5 329 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 METTL21CQ5VZV1 264 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 JMJD6Q6NYC1 403 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-220ENST00000588917 KBTBD2Q8IY47 623 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 LRRC25Q8N386 305 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-220ENST00000588917 RIT1Q92963 219 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 EXOSC8Q96B26 276 aaKnown RBP18.3■□□□□ 0.52
CIRBP-220ENST00000588917 RILPQ96NA2 401 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 OR52B2Q96RD2 323 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF160Q9HCG1 818 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 AIG1Q9NVV5 245 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 SH3BP4Q9P0V3 963 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 ATP6V1HQ9UI12 483 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 DCTN4Q9UJW0 460 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 G3BP2Q9UN86 482 aaKnown RBP18.3■□□□□ 0.52
CIRBP-220ENST00000588917 TRIM33Q9UPN9 1127 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 NUP210LQ5VU65 1888 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 IGHV3-20A0A0C4DH32 117 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 A0A0G2JND7 137 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 GMNCA6NCL1 334 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 GABRR3A8MPY1 467 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 A8MUA0 341 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 C17orf105B2RV13 164 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 AKAP10O43572 662 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 LRATO95237 230 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 ATP1B1P05026 303 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 SERPINA7P05543 415 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 LSP1P33241 339 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CLNS1AP54105 237 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 SRSF11Q05519 484 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 PDE7AQ13946 482 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 PTGR1Q14914 329 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CEBPEQ15744 281 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 BTBD16Q32M84 506 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CPTPQ5TA50 214 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CPZQ66K79 652 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 MMP21Q8N119 569 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 B3GNT7Q8NFL0 401 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CLHC1Q8NHS4 586 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 PTPMT1Q8WUK0 201 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 GFM2Q969S9 779 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 CNRIP1Q96F85 164 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF681Q96N22 645 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 WDR77Q9BQA1 342 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 NSRP1Q9H0G5 558 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 MRGBPQ9NV56 204 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 PPIEQ9UNP9 301 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 EXO1Q9UQ84 846 aaKnown RBP18.29■□□□□ 0.52
CIRBP-220ENST00000588917 GPR45Q9Y5Y3 372 aa18.29■□□□□ 0.52
CIRBP-220ENST00000588917 MYO1GB0I1T2 1018 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 SCAMP2O15127 329 aaKnown RBP18.28■□□□□ 0.52
CIRBP-220ENST00000588917 SLITRK5O94991 958 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 NTSP30990 170 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 FEN1P39748 380 aaKnown RBP18.28■□□□□ 0.52
CIRBP-220ENST00000588917 ARFIP2P53365 341 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 GYS2P54840 703 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 SLC26A5P58743 744 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 STX1BP61266 288 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 TBR1Q16650 682 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 DPY19L1Q2PZI1 675 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 CPLX4Q7Z7G2 160 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 RIMKLAQ8IXN7 391 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 GLB1L3Q8NCI6 653 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-220ENST00000588917 RFWD2Q8NHY2 731 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 PPWD1Q96BP3 646 aaKnown RBP18.28■□□□□ 0.52
CIRBP-220ENST00000588917 COQ8BQ96D53 544 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 ZBTB18Q99592 522 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 EBF4Q9BQW3 602 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 BRINP2Q9C0B6 783 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 KCNK13Q9HB14 408 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 MMP25Q9NPA2 562 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 C5AR2Q9P296 337 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 KLHL14Q9P2G3 628 aa18.28■□□□□ 0.52
CIRBP-220ENST00000588917 ALDOCP09972 364 aaKnown RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 NT5EP21589 574 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 GNGT1P63211 74 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 MAP4K2Q12851 820 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 SPRED3Q2MJR0 410 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 PDCD4Q53EL6 469 aaKnown RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 GALNT12Q8IXK2 581 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 CCDC116Q8IYX3 515 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 GALNT16Q8N428 558 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 NFAM1Q8NET5 270 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 VPS37AQ8NEZ2 397 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 OR1N1Q8NGS0 311 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 ZFP28Q8NHY6 868 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 ERP27Q96DN0 273 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 ZBED6CLQ96FA7 236 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 THOC1Q96FV9 657 aaKnown RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 VMP1Q96GC9 406 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 MESP1Q9BRJ9 268 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 BHLHE41Q9C0J9 482 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 LHPPQ9H008 270 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 CXorf21Q9HAI6 301 aa18.27■□□□□ 0.52
CIRBP-220ENST00000588917 ACSS1Q9NUB1 689 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-220ENST00000588917 TMEM45AQ9NWC5 275 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms