RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ABHD18Q0P651 414 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 SLC13A2Q13183 592 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 DSG2Q14126 1118 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 C1orf189Q5VU69 101 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 RHBDD2Q6NTF9 364 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PWWP2BQ6NUJ5 590 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 CLIP3Q96DZ5 547 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 TRIM4Q9C037 500 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 STRADBQ9C0K7 418 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 RAD21L1Q9H4I0 556 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PCDHGA1Q9Y5H4 931 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 FER1L5A0AVI2 2057 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 KIF26BQ2KJY2 2108 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 ACOT8O14734 319 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 POLR1CO15160 346 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 B4GALT2O60909 372 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 BCAS2O75934 225 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 HTR1EP28566 365 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 CCT3P49368 545 aaKnown RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 DUSP2Q05923 314 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 TRIP6Q15654 476 aaKnown RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 CYP51A1Q16850 503 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 SERPINA11Q86U17 422 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 DHFR2Q86XF0 187 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 HIPK4Q8NE63 616 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 CMKLR1Q99788 373 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 MUC13Q9H3R2 512 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 SIRT3Q9NTG7 399 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-209ENST00000588857 TRPC4Q9UBN4 977 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 EGFL7Q9UHF1 273 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 ACSL6Q9UKU0 697 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 MAP4K5Q9Y4K4 846 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 PCDHB3Q9Y5E6 796 aa20.92■□□□□ 0.94
ATG4D-209ENST00000588857 MGRN1O60291 552 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 CTNSO60931 367 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 C1QCP02747 245 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 FHP07954 510 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 FGF5P12034 268 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 SOX11P35716 441 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 OR4D2P58180 307 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 INSM1Q01101 510 aaPredicted RBP20.91■□□□□ 0.94
ATG4D-209ENST00000588857 RGNQ15493 299 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 GLIPR1L2Q4G1C9 344 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 ARHGAP40Q5TG30 622 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 BMPERQ8N8U9 685 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 OR9A2Q8NGT5 310 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 STMN2Q93045 179 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 ANKRD9Q96BM1 317 aaPredicted RBP20.91■□□□□ 0.94
ATG4D-209ENST00000588857 OR1F2PQ96R84 312 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 PRTFDC1Q9NRG1 225 aa20.91■□□□□ 0.94
ATG4D-209ENST00000588857 FAM220BPB1ANY3 271 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 GSTA4O15217 222 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 GMNNO75496 209 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 CDC123O75794 336 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-209ENST00000588857 IL10P22301 178 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 CRATP43155 626 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 HSD17B7P56937 341 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 MC2RQ01718 297 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 VAC14Q08AM6 782 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 STX4Q12846 297 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 ERV3-1Q14264 604 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
ATG4D-209ENST00000588857 BHLHB9Q6PI77 547 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 TMEM64Q6YI46 380 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 SZRD1Q7Z422 152 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 CALHM3Q86XJ0 350 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 PTRH1Q86Y79 214 aaKnown RBP20.9■□□□□ 0.94
ATG4D-209ENST00000588857 BHLHE22Q8NFJ8 381 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-209ENST00000588857 OR52N2Q8NGI0 321 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 JADE3Q92613 823 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 MOAP1Q96BY2 351 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 NEURL3Q96EH8 262 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 LRGUKQ96M69 825 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 TRIM15Q9C019 465 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 C3orf14Q9HBI5 128 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 APMAPQ9HDC9 416 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 FBXO8Q9NRD0 319 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 USP22Q9UPT9 525 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 SNX13Q9Y5W8 968 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 NUP210LQ5VU65 1888 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 SPEGQ15772 3267 aa20.9■□□□□ 0.94
ATG4D-209ENST00000588857 ELOVL7A1L3X0 281 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 TIAF1O95411 115 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 PTGER1P34995 402 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 ERFP50548 548 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 TP53BP2Q13625 1128 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 CCNIQ14094 377 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.89■□□□□ 0.94
ATG4D-209ENST00000588857 SAXO2Q658L1 398 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 TMEM107Q6UX40 140 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 GPR155Q7Z3F1 870 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 RNF130Q86XS8 419 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 C10orf67Q8IYJ2 551 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 SFXN5Q8TD22 340 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 REXO5Q96IC2 774 aaKnown RBP20.89■□□□□ 0.94
ATG4D-209ENST00000588857 MAGED4Q96JG8 741 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 CTRCQ99895 268 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 SPATA9Q9BWV2 254 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 ZCCHC3Q9NUD5 404 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms