RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC25A30Q5SVS4 291 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 C9orf64Q5T6V5 341 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SLX4IPQ5VYV7 408 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM236Q5W0B7 351 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 KIAA1211LQ6NV74 962 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CD300LDQ6UXZ3 194 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 NUDT18Q6ZVK8 323 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 OR8J1Q8NGP2 316 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 OR5K2Q8NHB8 316 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM80Q96HE8 168 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 COX14Q96I36 57 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CAMK1GQ96NX5 476 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 MYOCQ99972 504 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CCDC32Q9BV29 185 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 MND1Q9BWT6 205 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TEX12Q9BXU0 123 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 NMNAT1Q9HAN9 279 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 C3orf14Q9HBI5 128 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SEMA3GQ9NS98 782 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SCHIP1Q9P0W5 487 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 ANKMY1Q9P2S6 941 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 FTSJ1Q9UET6 329 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF229Q9UJW7 825 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC9A8Q9Y2E8 581 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 IFT52Q9Y366 437 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SNX8Q9Y5X2 465 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 DMXL1Q9Y485 3027 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 DNAH14Q0VDD8 3507 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 PRAMEF33A0A0G2JMD5 474 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 KRT87PA6NCN2 255 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 PCDH17O14917 1159 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 ZW10O43264 779 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 PRAMEF10O60809 474 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC35G4P0C7Q5 338 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 NTSP30990 170 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 OR1E2P47887 323 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 KHKP50053 298 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 MC1RQ01726 317 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 OCLNQ16625 522 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 TMEM44Q2T9K0 475 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 C19orf48Q6RUI8 117 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 TMEM64Q6YI46 380 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 C6orf120Q7Z4R8 191 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 SRFBP1Q8NEF9 429 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 SFXN5Q8TD22 340 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 UBE2FQ969M7 185 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 TM4SF18Q96CE8 201 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 MGLLQ99685 303 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 NIPSNAP1Q9BPW8 284 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 C6orf62Q9GZU0 229 aaPredicted RBP13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 SYNDIG1Q9H7V2 258 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 FZD3Q9NPG1 666 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 OBP2AQ9NY56 170 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 GPR83Q9NYM4 423 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 CALML5Q9NZT1 146 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.28
NEDD4L-223ENST00000588516 DSPPQ9NZW4 1301 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 BAHCC1Q9P281 2608 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 BOLA2-SMG1P6H3BVE0 249 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SAP18O00422 153 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 NDUFS4O43181 175 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 MFN2O95140 757 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 DBTP11182 482 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 ALDH4A1P30038 563 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 C21orf33P30042 268 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 BSGP35613 385 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 KCNJ5P48544 419 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 CCT3P49368 545 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 RUNX1T1Q06455 604 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 MPEG1Q2M385 716 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 KLHL22Q53GT1 634 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 METRNLQ641Q3 311 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 ZC3H14Q6PJT7 736 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 KLHL17Q6TDP4 642 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 ZBTB46Q86UZ6 589 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 CCDC103Q8IW40 242 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SIX5Q8N196 739 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SETD6Q8TBK2 473 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC38A5Q8WUX1 472 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 GTPBP3Q969Y2 492 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC35G5Q96KT7 338 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 BTBD2Q9BX70 525 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 NUAK2Q9H093 628 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 POLR2J3Q9H1A7 115 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms