RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 A0A1W2PR48 441 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 LRRC3CA6NJW4 275 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 HSPB2A8KAH6 182 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 FAM47E-STBD1D6RA91 191 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 KERAO60938 352 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 EEDO75530 441 aaKnown RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 C1QAP02745 245 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 BMP5P22003 454 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 PTX3P26022 381 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 GDF1P27539 372 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 CRABP2P29373 138 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 BUD31P41223 144 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 PIK3CBP42338 1070 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 SLC37A1P57057 533 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 PCDH1Q08174 1060 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 HSPB2Q16082 182 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 TMEM198Q66K66 360 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 SEM1Q6ZVN7 128 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 LRRC25Q8N386 305 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ZCCHC7Q8N3Z6 543 aaKnown RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 UBTD2Q8WUN7 234 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 WWTR1Q9GZV5 400 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ACTR8Q9H981 624 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 DMRT3Q9NQL9 472 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ZNF358Q9NW07 568 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 CRIM1Q9NZV1 1036 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 B4GALT7Q9UBV7 327 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 CNOT11Q9UKZ1 510 aaKnown RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ACOT9Q9Y305 439 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ASB4Q9Y574 426 aa13.01□□□□□ -0.33
ERCC1-205ENST00000587888 ANKRD17O75179 2603 aaKnown RBP13.01□□□□□ -0.33
ERCC1-205ENST00000587888 AKAP9Q99996 3911 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 C2orf92A0A1B0GVN3 265 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 FAM187AA6NFU0 413 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 KDM4EB2RXH2 506 aaPredicted RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 SYT5O00445 386 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 RAD51CO43502 376 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 TMPRSS11DO60235 418 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 ACSL3O95573 720 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 GBAP04062 536 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 GSTA2P09210 222 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 FAM58BPP0C7Q3 252 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 MTHFD2P13995 350 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 SSTR4P31391 388 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 NEK2P51955 445 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 IRF9Q00978 393 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 DUSP8Q13202 625 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 CPSF6Q16630 551 aaKnown RBP eCLIP13□□□□□ -0.33
ERCC1-205ENST00000587888 PFKFB4Q16877 469 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 LIPJQ5W064 366 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 BICRALQ6AI39 1079 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 CYP20A1Q6UW02 462 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 TNIP2Q8NFZ5 429 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 FBF1Q8TES7 1133 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 KCTD4Q8WVF5 259 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 DIO2Q92813 273 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 MRRFQ96E11 262 aaKnown RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 FOXC2Q99958 501 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 PELOQ9BRX2 385 aaKnown RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 LYARQ9NX58 379 aaKnown RBP13□□□□□ -0.33
ERCC1-205ENST00000587888 QPCTLQ9NXS2 382 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 GRHL1Q9NZI5 618 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 RNF14Q9UBS8 474 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 PCDHGA11Q9Y5H2 935 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 NINQ8N4C6 2090 aa13□□□□□ -0.33
ERCC1-205ENST00000587888 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 A0A1W2PS29 197 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 TP53I11O14683 189 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 PGRMC2O15173 223 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 EPPINO95925 133 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 CLPSP04118 112 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 NR2F6P10588 404 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 GFAPP14136 432 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 BSGP35613 385 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 MAGEA4P43358 317 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 PIK3CGP48736 1102 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 PLTPP55058 493 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 FBXW4P57775 412 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 PHEXP78562 749 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 EBPQ15125 230 aaKnown RBP12.99□□□□□ -0.33
ERCC1-205ENST00000587888 TOMM20Q15388 145 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 CEBPEQ15744 281 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 NTRK2Q16620 822 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 SPRED3Q2MJR0 410 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 HLA-DQA1Q5Y7H0 255 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 MAATS1Q7Z4T9 603 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-205ENST00000587888 CHDHQ8NE62 594 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-205ENST00000587888 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-205ENST00000587888 TIMP4Q99727 224 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms