RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 XKP51811 444 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 HK2P52789 917 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 TRA2BP62995 288 aaKnown RBP13.76□□□□□ -0.21
ATG4D-207ENST00000587256 BTKQ06187 659 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
ATG4D-207ENST00000587256 CEP85LQ5SZL2 805 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 FHL5Q5TD97 284 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 RNF111Q6ZNA4 994 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 SLC29A4Q7RTT9 530 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 C9orf40Q8IXQ3 194 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 MMP21Q8N119 569 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 APIPQ96GX9 242 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 MECRQ9BV79 373 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 EBPLQ9BY08 206 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 PFDN4Q9NQP4 134 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 HPF1Q9NWY4 346 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 FIS1Q9Y3D6 152 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 ERLIN1O75477 346 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 CHEK2O96017 543 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 IL3P08700 152 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 CPMP14384 443 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 CREB1P16220 341 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 NT5EP21589 574 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 SERPINB3P29508 390 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 SOX3P41225 446 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 SRSF11Q05519 484 aaKnown RBP13.75□□□□□ -0.21
ATG4D-207ENST00000587256 GPALPP1Q8IXQ4 340 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 ZIM3Q96PE6 472 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 TRIM45Q9H8W5 580 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-207ENST00000587256 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 RRAGDQ9NQL2 400 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-207ENST00000587256 PSME2Q9UL46 239 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 DLGAP4Q9Y2H0 992 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 KLF13Q9Y2Y9 288 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-207ENST00000587256 ESPL1Q14674 2120 aa13.75□□□□□ -0.21
ATG4D-207ENST00000587256 RELNP78509 3460 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 SERTM1A2A2V5 107 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 AZIN1O14977 448 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 NPHS1O60500 1241 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 OR6B1O95007 311 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ANXA4P09525 319 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 PORP16435 677 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF24P17028 368 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 GALNSP34059 522 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 RAE1P78406 368 aaKnown RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ALDH6A1Q02252 535 aaKnown RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF763Q0D2J5 394 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 UBAP2LQ14157 1087 aaKnown RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF750Q32MQ0 723 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 IL20RBQ6UXL0 311 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZCCHC23Q6ZST2 131 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF227Q86WZ6 799 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 FRMD6Q96NE9 622 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 EML4Q9HC35 981 aaKnown RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 UTS2RQ9UKP6 389 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF780BQ9Y6R6 833 aa13.74□□□□□ -0.21
ATG4D-207ENST00000587256 USP9XQ93008 2570 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CLEC18AA5D8T8 446 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 ASPDHA6ND91 283 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CTIFO43310 598 aaKnown RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 TYROBPO43914 113 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 UNC5CO95185 931 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CHRNGP07510 517 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 MYZAPP0CAP1 466 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CSNK2A2P19784 350 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 SSTR4P31391 388 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 FEN1P39748 380 aaKnown RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 SLC37A1P57057 533 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 HLA-DQA1Q5Y7H0 255 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 KANK2Q63ZY3 851 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 GALNT18Q6P9A2 607 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 OPN5Q6U736 354 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CLEC18BQ6UXF7 455 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 GFRALQ6UXV0 394 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 TRIM46Q7Z4K8 759 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 MDGA2Q7Z553 956 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 LRRC25Q8N386 305 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 VWA5B2Q8N398 1253 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms