RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SH3BGRLO75368 114 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 OR2J2O76002 312 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 RAF1P04049 648 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 ALDOAP04075 364 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 TPOP07202 933 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 HOXD4P09016 255 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 PTX3P26022 381 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 BUD31P41223 144 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 SERPINB9P50453 376 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 HK2P52789 917 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 SLAMF1Q13291 335 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 GTF2H2Q13888 395 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 PCBP2Q15366 365 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 RNFT1Q5M7Z0 435 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 GTF2H2CQ6P1K8 395 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 CDC20BQ86Y33 519 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 ZCCHC7Q8N3Z6 543 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 MMGT1Q8N4V1 131 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 ZFP62Q8NB50 900 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 SLC2A12Q8TD20 617 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 PHF10Q8WUB8 498 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 TANKQ92844 425 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 ART5Q96L15 291 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 DGAT2Q96PD7 388 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 RASL10BQ96S79 203 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 FMO2Q99518 471 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 MTERF1Q99551 399 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 FUT8Q9BYC5 575 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 VPS11Q9H270 941 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 OR51B5Q9H339 312 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 RPF2Q9H7B2 306 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 IPPKQ9H8X2 491 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 LYARQ9NX58 379 aaKnown RBP10.3□□□□□ -0.76
CCDC47-206ENST00000584112 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 DYSFO75923 2080 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 MYOCOSA0A1B0GUC4 107 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 E9PLN8 166 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 ACOT7O00154 380 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 WWP2O00308 870 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SAP18O00422 153 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PLPP1O14494 284 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 HS6ST1O60243 411 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RBP1P09455 135 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 CNTFP26441 200 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PTGER1P34995 402 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PTGS2P35354 604 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 ARL1P40616 181 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SOX3P41225 446 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 STT3AP46977 705 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 GPR85P60893 370 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RPS13P62277 151 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RNF4P78317 190 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 IGLV3-21P80748 117 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 HSF1Q00613 529 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PLIN5Q00G26 463 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TNFRSF17Q02223 184 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 CUL3Q13618 768 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TSNAXIP1Q2TAA8 658 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TECRLQ5HYJ1 363 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PAOXQ6QHF9 649 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 OPN5Q6U736 354 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 CYP20A1Q6UW02 462 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 IL20RBQ6UXL0 311 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RTL4Q6ZR62 310 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 MDGA2Q7Z553 956 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 GOLGA7Q7Z5G4 137 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 GPR180Q86V85 440 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 ZZZ3Q8IYH5 903 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 L3MBTL4Q8NA19 623 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 AGAP11Q8TF27 550 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SLC44A1Q8WWI5 657 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 ANKRD9Q96BM1 317 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 GPR78Q96P69 363 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 VKORC1Q9BQB6 163 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PELOQ9BRX2 385 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 CDC42EP4Q9H3Q1 356 aaKnown RBP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 OCEL1Q9H607 264 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 NEUROD4Q9HD90 331 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PSD3Q9NYI0 1048 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 PPT2Q9UMR5 302 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TENM1Q9UKZ4 2725 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TRRAPQ9Y4A5 3859 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 WNK1Q9H4A3 2382 aa10.29□□□□□ -0.76
CCDC47-206ENST00000584112 TRIM64A6NGJ6 449 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 TRIM64BA6NI03 449 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 FOXE1O00358 373 aaPredicted RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 FGF17O60258 216 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 CDC40O60508 579 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 SMIM24O75264 130 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 OR6B1O95007 311 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 CLDN9O95484 217 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ACSL3O95573 720 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 COL6A2P12110 1019 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 RFC3P40938 356 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms