RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 RFC3P40938 356 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 XKP51811 444 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 NAGLUP54802 743 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 CASP6P55212 293 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 SPRED3Q2MJR0 410 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.92■□□□□ 0.62
SS18-224ENST00000584083 CFAP157Q5JU67 520 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 RNFT1Q5M7Z0 435 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 RNF111Q6ZNA4 994 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 SLC29A4Q7RTT9 530 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 C9orf40Q8IXQ3 194 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 C4orf33Q8N1A6 199 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 PSD4Q8NDX1 1056 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 NUBPLQ8TB37 319 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 MAGED4Q96JG8 741 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 SH3BGRL2Q9UJC5 107 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 TIMM22Q9Y584 194 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 PCDHA9Q9Y5H5 950 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 A0A1W2PS29 197 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 TFECO14948 347 aaPredicted RBP18.91■□□□□ 0.62
SS18-224ENST00000584083 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
SS18-224ENST00000584083 SLC19A2O60779 497 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 ESRRBO95718 433 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 CPA3P15088 417 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 CHN1P15882 459 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 GALNSP34059 522 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 DEKP35659 375 aaKnown RBP18.91■□□□□ 0.62
SS18-224ENST00000584083 HTR6P50406 440 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 IFFO1Q0D2I5 559 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 MPEG1Q2M385 716 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 ZNF750Q32MQ0 723 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 PIGGQ5H8A4 983 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 C6orf163Q5TEZ5 329 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 RTL4Q6ZR62 310 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 SIAH3Q8IW03 269 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 GBP7Q8N8V2 638 aaPredicted RBP18.91■□□□□ 0.62
SS18-224ENST00000584083 RDH11Q8TC12 318 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 SLC22A8Q8TCC7 542 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 AGAP11Q8TF27 550 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 RELTQ969Z4 430 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 GAL3ST4Q96RP7 486 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 KCNA7Q96RP8 456 aa18.91■□□□□ 0.62
SS18-224ENST00000584083 C12orf65Q9H3J6 166 aaKnown RBP18.91■□□□□ 0.62
SS18-224ENST00000584083 DOPEY1Q5JWR5 2465 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 C1orf226A1L170 272 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 CCL21O00585 134 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 ZNF354AO60765 605 aaPredicted RBP18.9■□□□□ 0.62
SS18-224ENST00000584083 CRCPO75575 148 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 NT5EP21589 574 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 ALDH9A1P49189 494 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 NAA20P61599 178 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 HIST2H2BCQ6DN03 193 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 SCIMPQ6UWF3 145 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 MAMDC2Q7Z304 686 aaPredicted RBP18.9■□□□□ 0.62
SS18-224ENST00000584083 MMP21Q8N119 569 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 CHTF18Q8WVB6 975 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 TM4SF18Q96CE8 201 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 FAIM2Q9BWQ8 316 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 ACPTQ9BZG2 426 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 CXorf21Q9HAI6 301 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.9■□□□□ 0.62
SS18-224ENST00000584083 PSME2Q9UL46 239 aa18.9■□□□□ 0.62
SS18-224ENST00000584083 V9GYY5 206 aaPredicted RBP18.9■□□□□ 0.62
SS18-224ENST00000584083 GOLGA6L10A6NI86 522 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 OR6C76A6NM76 312 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 CYSRT1A8MQ03 144 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 G3V3Y1 287 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 UBFD1O14562 309 aaKnown RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 ZG16O60844 167 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 ERAL1O75616 437 aaKnown RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 CPMP14384 443 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 PORP16435 677 aaPredicted RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 SSTR4P31391 388 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 CA7P43166 264 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 SLC37A1P57057 533 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 DNAJB13P59910 316 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 HMGCS1Q01581 520 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 PLGLB1Q02325 96 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 SLC18A2Q05940 514 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 BTKQ06187 659 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 ACSM2AQ08AH3 577 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 ACSM2BQ68CK6 577 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 SLC48A1Q6P1K1 146 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 GALNT12Q8IXK2 581 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 GHDCQ8N2G8 530 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 RIBC1Q8N443 379 aaPredicted RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 ZFP62Q8NB50 900 aaPredicted RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 SGCZQ96LD1 299 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 IQCGQ9H095 443 aaKnown RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 DEPPQ9NTK1 212 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 SUCOQ9UBS9 1254 aaKnown RBP18.89■□□□□ 0.61
SS18-224ENST00000584083 MID2Q9UJV3 735 aa18.89■□□□□ 0.61
SS18-224ENST00000584083 GNG14A0A1W2PPG7 69 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 HS6ST1O60243 411 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 PCDH7O60245 1069 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 CLDN1O95832 211 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 NUDT17P0C025 328 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 ABOP16442 354 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 FEN1P39748 380 aaKnown RBP18.88■□□□□ 0.61
SS18-224ENST00000584083 TRA2BP62995 288 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms