RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 BCL2A1Q16548 175 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 EXOC3L2Q2M3D2 409 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 PARP6Q2NL67 630 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 STAC2Q6ZMT1 411 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 BEND4Q6ZU67 534 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 USP43Q70EL4 1123 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 FAM214BQ7L5A3 538 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 YRDCQ86U90 279 aaKnown RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 STK32CQ86UX6 486 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 REXO1L1PQ8IX06 675 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 STEAP2Q8NFT2 490 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 OR4K1Q8NGD4 311 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 OR14L1PQ8NHC6 308 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 SPPL2AQ8TCT8 520 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 ZNF721Q8TF20 911 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 ANKRD7Q92527 254 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 SMIM10Q96HG1 83 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 USB1Q9BQ65 265 aaKnown RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 G6PC3Q9BUM1 346 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 CACNG6Q9BXT2 260 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 ACTR6Q9GZN1 396 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 ACTR8Q9H981 624 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 EIF2B3Q9NR50 452 aaKnown RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 SNX15Q9NRS6 342 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 MED29Q9NX70 200 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 TEX10Q9NXF1 929 aaPredicted RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 CISD1Q9NZ45 108 aaKnown RBP5.72□□□□□ -1.49
NUP85-221ENST00000583548 SH2B3Q9UQQ2 575 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 PCDHGB1Q9Y5G3 927 aa5.72□□□□□ -1.49
NUP85-221ENST00000583548 hCG_1818297A0A087WSY0 165 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 GOLGA6L9A6NEM1 432 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 OR6C76A6NM76 312 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ERI2A8K979 691 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 BTNL10A8MVZ5 291 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 H7C417 338 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 CBR3O75828 277 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 LRATO95237 230 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SERPING1P05155 500 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SERPINA6P08185 405 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 RHOXF2BP0C7M4 288 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ZNF708P17019 499 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 PSMB1P20618 241 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 SAT1P21673 171 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 HNF4AP41235 474 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 CASP3P42574 277 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SCTRP47872 440 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 PDLIM4P50479 330 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 EFNA4P52798 201 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 NRG3P56975 720 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 HILS1P60008 231 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 BTN3A2P78410 334 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 GPS1Q13098 491 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 KCNJ11Q14654 390 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 CYP1B1Q16678 543 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ACSBG2Q5FVE4 666 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 LRRC8EQ6NSJ5 796 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 MRNIPQ6NTE8 343 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 DARS2Q6PI48 645 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 SBSNQ6UWP8 590 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 BBS12Q6ZW61 710 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SSX8Q7RTT4 187 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 CLNKQ7Z7G1 428 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SDCCAG8Q86SQ7 713 aaPredicted RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 PEG10Q86TG7 708 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 CCDC50Q8IVM0 306 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 C9orf40Q8IXQ3 194 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 TEX29Q8N6K0 151 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ZNF321PQ8N8H1 164 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 FAM47BQ8NA70 645 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ZNF540Q8NDQ6 660 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 OR6K3Q8NGY3 331 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 KCTD4Q8WVF5 259 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 GAL3ST3Q96A11 431 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ALKBH8Q96BT7 664 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 GAL3ST4Q96RP7 486 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 TCF12Q99081 682 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 PIMREGQ9BSJ6 248 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 PRR14Q9BWN1 585 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 HDHD5Q9BXW7 423 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 OR2B2Q9GZK3 357 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 RNF122Q9H9V4 155 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 PLSCR4Q9NRQ2 329 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 CBLN4Q9NTU7 201 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 WWOXQ9NZC7 414 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 KLHL42Q9P2K6 505 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 SLC2A6Q9UGQ3 507 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 DMGDHQ9UI17 866 aaKnown RBP5.71□□□□□ -1.5
NUP85-221ENST00000583548 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 EMC9Q9Y3B6 208 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 ZNF175Q9Y473 711 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 GTF3C3Q9Y5Q9 886 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 NCKAP5O14513 1909 aa5.71□□□□□ -1.5
NUP85-221ENST00000583548 TENM1Q9UKZ4 2725 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms