RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 EXT1Q16394 746 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 TBR1Q16650 682 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 R3HCC1LQ7Z5L2 792 aaKnown RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 GALNT12Q8IXK2 581 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 FAM9CQ8IZT9 166 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 ZNF321PQ8N8H1 164 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 TMEM102Q8N9M5 508 aaPredicted RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 ADCY4Q8NFM4 1077 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 SLC2A12Q8TD20 617 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 NCLNQ969V3 563 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 SIKE1Q9BRV8 207 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 CCDC28BQ9BUN5 200 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 GPR83Q9NYM4 423 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 DYRK3O43781 588 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 ITGAMP11215 1152 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 IDO1P14902 403 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 RPL3P39023 403 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 ARFIP2P53365 341 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 POLE2P56282 527 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 CLDN8P56748 225 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 MRPS35P82673 323 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 ZNF267Q14586 743 aaPredicted RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 MPEG1Q2M385 716 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 PLAG1Q6DJT9 500 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 SZRD1Q7Z422 152 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 KBTBD2Q8IY47 623 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 CCDC116Q8IYX3 515 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 B3GNT7Q8NFL0 401 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 OR9I1Q8NGQ6 314 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 SUN3Q8TAQ9 357 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 RIT1Q92963 219 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 RBM18Q96H35 190 aaKnown RBP13.08□□□□□ -0.32
GGA3-216ENST00000583282 TEX37Q96LM6 180 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 ZNF681Q96N22 645 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 KCNK13Q9HB14 408 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 GPR45Q9Y5Y3 372 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 MED13Q9UHV7 2174 aa13.08□□□□□ -0.32
GGA3-216ENST00000583282 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 GABRR3A8MPY1 467 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ANKRD28O15084 1053 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 DDAH2O95865 285 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 LAMP1P11279 417 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 PCSK2P16519 638 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 NCF2P19878 526 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 SSTR4P31391 388 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 CLNS1AP54105 237 aaKnown RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 TERF2Q15554 542 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 GSTA3Q16772 222 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 SPANXN4Q5MJ08 99 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 CPTPQ5TA50 214 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 OR4F3Q6IEY1 312 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 PAOXQ6QHF9 649 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 FAM111BQ6SJ93 734 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 TMEM107Q6UX40 140 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 MIER2Q8N344 545 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 NFAM1Q8NET5 270 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 THAP3Q8WTV1 239 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 KAT2AQ92830 837 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 VMP1Q96GC9 406 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 MAGED4Q96JG8 741 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ZBTB18Q99592 522 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 GLIPR2Q9H4G4 154 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ANKRA2Q9H9E1 313 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 CXorf21Q9HAI6 301 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 MAT2BQ9NZL9 334 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 KLHL14Q9P2G3 628 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 COPS7AQ9UBW8 275 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ZNF223Q9UK11 482 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 COPG1Q9Y678 874 aaKnown RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 CPAMD8Q8IZJ3 1885 aa13.07□□□□□ -0.32
GGA3-216ENST00000583282 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
GGA3-216ENST00000583282 USP24Q9UPU5 2620 aa13.06□□□□□ -0.32
GGA3-216ENST00000583282 DOCK10Q96BY6 2186 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms