RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 BCORP1Q8N888 145 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 TMEM178AQ8NBL3 297 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 AGR3Q8TD06 166 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 FAR1Q8WVX9 515 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 KLHL29Q96CT2 875 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 PSME2Q9UL46 239 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 DLGAP4Q9Y2H0 992 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 PTGDR2Q9Y5Y4 395 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 SHANK1Q9Y566 2161 aa11.71□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC28A1O00337 649 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 CDK2AP1O14519 115 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 RGS14O43566 566 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC25A12O75746 678 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 RSL1D1O76021 490 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 NEURL1O76050 574 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ZIC2O95409 532 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SP1P08047 785 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ANXA4P09525 319 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 CPMP14384 443 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 PORP16435 677 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 GALNSP34059 522 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 TRHRP34981 398 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 FEN1P39748 380 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ETV4P43268 484 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SERPINB4P48594 390 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 PMP22Q01453 160 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 MRPL49Q13405 166 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ELOAQ14241 798 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 MAPKAPK3Q16644 382 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SH2D4BQ5SQS7 431 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 KANK2Q63ZY3 851 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC25A25Q6KCM7 469 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 RNF111Q6ZNA4 994 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC29A4Q7RTT9 530 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 GALNT12Q8IXK2 581 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 DDIASQ8IXT1 998 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 CYP4Z2PQ8N1L4 340 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 OR8K3Q8NH51 312 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 C16orf78Q8WTQ4 265 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ASB15Q8WXK1 588 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 PGM2Q96G03 612 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 TAAR6Q96RI8 345 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 GAL3ST4Q96RP7 486 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 STMN4Q9H169 189 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 OLAHQ9NV23 265 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 CES1P1Q9UKY3 287 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 POLR3HQ9Y535 204 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF780BQ9Y6R6 833 aa11.7□□□□□ -0.54
SMARCE1-218ENST00000582955 TMEM200CA6NKL6 621 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 A8MVJ9 347 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TMEM233B4DJY2 109 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TM9SF1O15321 606 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SEC22BO75396 215 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 ZWINTO95229 277 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 CRYABP02511 175 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 NEFHP12036 1026 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 DRD2P14416 443 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SSTR4P31391 388 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SERPINB5P36952 375 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF763Q0D2J5 394 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 HEPACAMQ14CZ8 416 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TNFAIP8L3Q5GJ75 292 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM180BQ6P0A1 224 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 GALNT18Q6P9A2 607 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 IL20RBQ6UXL0 311 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 GALNTL5Q7Z4T8 443 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 CLYBLQ8N0X4 340 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM98AQ8NCA5 519 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TWIST2Q8WVJ9 160 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 RASL10BQ96S79 203 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 BARD1Q99728 777 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 BRINP2Q9C0B6 783 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TRIM45Q9H8W5 580 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 CXorf21Q9HAI6 301 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 HPF1Q9NWY4 346 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 SIRT5Q9NXA8 310 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 TRAF6Q9Y4K3 522 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 PCDHGB6Q9Y5F9 930 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 ACTL7BQ9Y614 415 aa11.69□□□□□ -0.54
SMARCE1-218ENST00000582955 ANKUB1A6NFN9 424 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 OR6C76A6NM76 312 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms