RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 GMNNO75496 209 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 CREG1O75629 220 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 KCNH1O95259 989 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 IGHEP01854 428 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ZGLP1P0C6A0 271 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 G6PDP11413 515 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ATP5A1P25705 553 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 CERS1P27544 350 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 XCR1P46094 333 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 NME5P56597 212 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 FOXK1P85037 733 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 MAT1AQ00266 395 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PIGGQ5H8A4 983 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 UBE3DQ7Z6J8 389 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 FUNDC1Q8IVP5 155 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ZC3H7AQ8IWR0 971 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 LIX1Q8N485 282 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 DPP10Q8N608 796 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ACOT4Q8N9L9 421 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 TBC1D20Q96BZ9 403 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 VPS50Q96JG6 964 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 LRGUKQ96M69 825 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PRPF18Q99633 342 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 LYRM4Q9HD34 91 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PRDM7Q9NQW5 492 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 LYARQ9NX58 379 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 MS4A12Q9NXJ0 267 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 STX18Q9P2W9 335 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 GIMAP2Q9UG22 337 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PHF11Q9UIL8 331 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ADAM29Q9UKF5 820 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 POMPQ9Y244 141 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 MAN2B2Q9Y2E5 1009 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 CCDC88CQ9P219 2028 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 BLACEA4D250 179 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 ENTPD5O75356 428 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 KLF7O75840 302 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 PDE5AO76074 875 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 BMP10O95393 424 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 ETHE1O95571 254 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 SFTPCP11686 197 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 CAPN3P20807 821 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 PRPS1L1P21108 318 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 F8A1P23610 371 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 HPCAL1P37235 193 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 CLDN8P56748 225 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 RAB38P57729 211 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 UFM1P61960 85 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 SNRPNP63162 240 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 RCN1Q15293 331 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 VPS26BQ4G0F5 336 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 TIGD2Q4W5G0 525 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 RFTN2Q52LD8 501 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 DHDDSQ86SQ9 333 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 METTL4Q8N3J2 472 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 NACC2Q96BF6 587 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 PEX11GQ96HA9 241 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 CLPTM1LQ96KA5 538 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 IP6K3Q96PC2 410 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 HBEGFQ99075 208 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 SPSB2Q99619 263 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 DDX31Q9H8H2 851 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 SEMA3GQ9NS98 782 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 CCL27Q9Y4X3 112 aa12.68□□□□□ -0.38
CSNK1D-220ENST00000581737 RTCAO00442 366 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 FBP2O00757 339 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 GUCY1B2O75343 617 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 B3GALT4O96024 378 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 FHP07954 510 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 BCKDHAP12694 445 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 S100A3P33764 101 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 BSGP35613 385 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 GSTM5P46439 218 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 HNRNPFP52597 415 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 POLE2P56282 527 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 OLR1P78380 273 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SRSF11Q05519 484 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 KLC1Q07866 573 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 KCNAB2Q13303 367 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SSPNQ14714 243 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 MAPKAPK3Q16644 382 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 UGT8Q16880 541 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SYT16Q17RD7 645 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 MINDY4Q4G0A6 757 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 VWA2Q5GFL6 755 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF793Q6ZN11 406 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms